Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1774 ATGAACAACATTTTGAAGAAGCTTCTCATAGATCACAACCACCACCCTAACCGATCCAATCAAATTCCCTCCATGACCTCTTCTTCCTCCGTCGCAATCCTTCTCCGGAAACCGCCGTGGACAACCGACAACACTATTCATACGACAGAATACAATGTGCTTGACTATGAGGAGAAAGTAGCAGATGGTTTTTATGATGTATATGGGCTCTCTACAGATATAGCAATGCAAGGAAAGATTCCATTTCTGACAGATCTTGAAGCAAAACCTGAAAGTACTGGTTTAGAAGTTGTCATAGTTGATTGTAAAATTGATCCTGCTCTCAAAGAACTGATGCAAATTGCACATTGTATTGCATTAGACTGTCCTGTCACTGAGGTTGCTATTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGCCATATGGGTGGTCCTGTAAAGGATGCTAATATTATACTTGCAAGATGGACAGAGAGAAGTAGAGAGTTAAGAACATCTCAAAATACTAGTGTGTTGCCTATTGGGTGCATAAATATTGGGCTCTCCAGACATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAAATGCCTTGTAGACTGGTAAAAGGTAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTCGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCCCCTGGAACGCTTATCCCTGTTGATATTTCAACTCCAAAGGATACTTCCTTGACTCCTAACAACCCCAAGGTTTTAGCAAGTTTACCTTCTGCTAAGGAAACTGATTTTTATTACACTAGACTAGTGCCATCTCATGGTGATGGTATTAGTCAGAATTCTGCAGTAGAAGGTTCTTCACCATTCAATGGAGGCTCTGGTGTTCATCCCTCAAACATACCTAATAGAATGACTCCTAACCAACTAGAAAATATTGCACAACCATCTCGTGCTTTTATGTACAAAGGGATTCATGGAATAAATGTAGCTGGTAACAGGACTAGACTGAATGTCAATGTTGTACCATATGGCCAGAAAAATTCTGATGACTCTCGGAGCCTTTCTGCTGAGCTTAACCCTTTCCAGATAAAAGGAACTAGCAAGATCACTGATCGTAACAGGACTGTAGAAAATAAAGCTCCCGATCTTCAGAGTACAAGAAAAAATACTGTGTGTGGTAGACCCCCTGGCCCTTTGGCGTGGAAGAATTGTTGTGCTTACAATGAAGACCCCAGGAAAGTTAATCGTGATCCTAATGATTACAACTTTTCTAATAGTTCTTCCATATCTGAAAAGTTTGATCACAATGGTTCCAAATCACCAAATAGTTCAAATTTAAGGAATGATAGAAAAGCTCCAAAGTTTGCCCAAGATATTGGTTCAGTTGCACGATTTGGTGCAGACGAATTGGAGAGGTTTGAGGATCTGAATGTTGATTGTAACAGAGGCAAACCGGAAAATTATCGAAATGACTTGTTAGATGTGGTTATAGCACACAAGAACATTAAAATCGGTTATCTTGACCAGAGGAAGGGCACACGTGACATATTCATGGGGGAAAACTTGAAATTAAAGGGTCCAGATAGTCTTAGCTCCCCGATTGATTCCAATACAAACAAGATTGATCGGATGTTTGATGATGTAGATGTCAATGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATTCCATGCTGACTGGAATGAAACCGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCTGGCGATGCCTTGTCTGAATTCAAAAGAGAAGTGCGGATAATGCGTAGACTGCATCATCCAAATGTTGTTCATTTTATTGGTGCCGTTACTCGTCCTCCCAATCTCTCAATCATTACAGAGTTTCTTCGAAGAGGGAGCTTGTATCATATTCTTCATCGTCCTCATTGCCAGATCGATGAGAAACAAAGGATAAAAATTGCTCTGGATGTGGTATGTGATTTTGGGTTGTCACGCTTGAAACACAACACATTTTTGTCATCCAAGTCAACCTCTGGAACGCCTGAATGGATGGCACCTGAAGTTCTCCGCAATGAGCCCTCAAATGAAAAATGTGACGTTTATAGTTTTGGAGTCATTCTCTGGGAGCTTGTAACTTTAAAGTTGCCTTGGACAGGATTGAATCCTATGCAAGTTGTTGCTGCAGTGGGTTTTCAAGACCGTCACCTTGATATCCCTATGGATGTTGACCCTTTAGTTGCAAGCATAATCTGGGAATGTTTGCAGAAGGATCCAAATTTGCGTCCCTCATTTGCACAGCTTACTGTCGCTCTAAAGCCTCTGCAACGTCTATCTATCCCATCTCATCAAGACCGGATGCCGTAA 2406 0.4098 MNNILKKLLIDHNHHPNRSNQIPSMTSSSSVAILLRKPPWTTDNTIHTTEYNVLDYEEKVADGFYDVYGLSTDIAMQGKIPFLTDLEAKPESTGLEVVIVDCKIDPALKELMQIAHCIALDCPVTEVAILVQRLAELVTGHMGGPVKDANIILARWTERSRELRTSQNTSVLPIGCINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKFEDEREFLVDLMAAPGTLIPVDISTPKDTSLTPNNPKVLASLPSAKETDFYYTRLVPSHGDGISQNSAVEGSSPFNGGSGVHPSNIPNRMTPNQLENIAQPSRAFMYKGIHGINVAGNRTRLNVNVVPYGQKNSDDSRSLSAELNPFQIKGTSKITDRNRTVENKAPDLQSTRKNTVCGRPPGPLAWKNCCAYNEDPRKVNRDPNDYNFSNSSSISEKFDHNGSKSPNSSNLRNDRKAPKFAQDIGSVARFGADELERFEDLNVDCNRGKPENYRNDLLDVVIAHKNIKIGYLDQRKGTRDIFMGENLKLKGPDSLSSPIDSNTNKIDRMFDDVDVNECEIPWEDLVIGERIGLGSYGEVFHADWNETEVAVKKFLDQDFSGDALSEFKREVRIMRRLHHPNVVHFIGAVTRPPNLSIITEFLRRGSLYHILHRPHCQIDEKQRIKIALDVVCDFGLSRLKHNTFLSSKSTSGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELVTLKLPWTGLNPMQVVAAVGFQDRHLDIPMDVDPLVASIIWECLQKDPNLRPSFAQLTVALKPLQRLSIPSHQDRMP 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1774 801 MobiDBLite consensus disorder prediction 424 456 - -
Lal16g1774 801 SUPERFAMILY Protein kinase-like (PK-like) 549 781 IPR011009 -
Lal16g1774 801 MobiDBLite consensus disorder prediction 376 399 - -
Lal16g1774 801 MobiDBLite consensus disorder prediction 421 459 - -
Lal16g1774 801 MobiDBLite consensus disorder prediction 282 312 - -
Lal16g1774 801 CDD STKc_MAP3K-like 572 782 - -
Lal16g1774 801 Pfam Protein tyrosine and serine/threonine kinase 672 783 IPR001245 GO:0004672|GO:0006468
Lal16g1774 801 Pfam Protein tyrosine and serine/threonine kinase 567 671 IPR001245 GO:0004672|GO:0006468
Lal16g1774 801 Pfam Ethylene-responsive protein kinase Le-CTR1 50 239 - -
Lal16g1774 801 Gene3D Phosphorylase Kinase; domain 1 559 643 - -
Lal16g1774 801 PANTHER SERINE-THREONINE PROTEIN KINASE 35 671 - -
Lal16g1774 801 PANTHER SERINE-THREONINE PROTEIN KINASE 672 799 - -
Lal16g1774 801 ProSiteProfiles Protein kinase domain profile. 566 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1774 801 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 35 671 - -
Lal16g1774 801 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 672 799 - -
Lal16g1774 801 Gene3D Transferase(Phosphotransferase) domain 1 656 795 - -
Lal16g1774 801 ProSitePatterns Protein kinases ATP-binding region signature. 572 594 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1774 Lal-Chr16 16791559 16800906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1774 27 769 MAP Kinase Kinase Kinase AT1G08720 48.952 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal16g1774 EDR1 2.2e-71 CL0125