Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1761 ATGGAGAATCTGAACTTACCTGCTAATTCGGATCCTGATGCCAGCAGCGACCGATCAGGTTCATTTCGTGTATTTGAACCATCGACGAGTCAAGATGTTGGACAGACGAGTAGTAGAAGAGAGCAAAATGTTACAGAAGCTGTAAGACTCGATGGACGTTCGACGAATGCTTCCTCTAATTCTGCAGGCAGCAGGGGGGAATCTGTCAGCAAGTGGATGGCATTCGCTACGGAGTCGGGATTCGATGATAGCAACTCTAAAATGAAGTTTCTTTCTGGGGATAAAAATATAGCGAAAGACAAAACCTTGAGGACTGGTCAGAATGGAAAGTCATCTTCGGATCATAAACAAGTTTCAACCGAAGCAAGCATAGCTGAGAGAACTGCCGAGTGGGGTGTTGTCGCGAATTTGGATAGTTTTAAGACCTCTTTTGATGGTGACAGGATTAAAAAATTATCCGATAGATTCGTTGAATCAACAAGGACATCCGGGGAATCAAGTTATGAGTCCGAGTCATCATCAGGGGTGATCCCAAGGGTCTCACAAGAGTTAAAGGAAGCATTGGAGACGCTACAACAGACATTTGTTGTATCGGATGCAACAAAGCCAGATTGTCCAATCATGTATGCTAGCACCGGCTTTTTTAGTATGACTGGTTATTCGTCAAAGGAGATTATCGGAAGGAACTGCCGATTTCTTCAGGGACCTGATACAGACAAAAATGAAGTGGCGAAAATTCGGGATGCAACTAGAAATGGAAAAACTTATTGTGGAAGGCTTTTAAACTACAAGAAAAATGGAACTCCATTCTGGAATCTTCTCACTATCACCCCCATCAAAGATGACCATGGCAATACAATCAAATTCATTGGAATGCAGGTTGAAGTGAGCAAGTACACAGAAGGTCTGAATGAAAATGTGTTACGACCAAATGGATTGCCGAAGTCATTAATTCGTTACGATGCTCGTCAAAAGGAGACAGCTCTGTGTTCCATGACCGAGGTAGTCCAAACTGTTAAGGATCCAAAATCCATTATTCGGGCTAGGATTGATGATACTGCTACCAAGAACGAAGAGCAAGAGAAGCCTAATTTTGATTTTGTTTTGCCGAAGTCGGTTGAAACCGGGCATACAAGTTTACCTGGTAGACAACCTTCTCCACTTAACATCCAAGGTGATATATCACGCATGAGTTCTACTCAGGATAGGAAGAGCAAGTCATCAAGAATATCGGGCCGGACTCCTTCATTGAGTTTCAAAGGGAAATCTCTGAGTTCTGTCAGGGGAGAGGAGGAGAAGCCAATTGTTGAACCCGAGGTTTTGATGACTAAGGAAATAGAGCGGTCCGAAAGTTTGGACCGTTCTCAAAGAGAAAGGGATATAAGGCAAGGAATCGATTTAGCAACCACATTGGAGCGTATAGAGAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACAGAGTATACGCGAGAAGAAATTTTGGGACGAAACTGTCGGTTTCTTCAAGGACCGGAAACGGATATGTCAACCGTGGATAAGATTAGAGATGCTATCAGAGAGCAGAGGGAGATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTTTGGAATTTGTTTCACTTGCAACCTATGAGAGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGATGGAAGTGATCATGTAGAACCCTTACAAAACCGTCTATCCGAGCGAGCCGAGCTACAAAGTTCTAAGCTGGTTAAAGCCACTGCAGTAAATGTTGATGAAGCTGTCAGAGAACTTCCTGATGCAAATTTGAGACCAGAAGATTTGTGGGCAATTCATTCCAAACCTGTATTTCCACTACCTCACAAAAGGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGAGACAAAACGATTGGCTTGCATAATTTTGTGCCCATGAGGCCATTGGGCTGTGGAGATACTGGCAGTGTTCATCTGGTGGAACTCCAAGGTACTGGTGAACTATATGCAATGAAGGCAATGGAAAAATCTGTAATGCTAAATCGTAATAAGGTTCACCGTGCATGCATTGAGAGAGAGATCATATCATTACTTGATCATCCTTTTCTTCCAACACTATACACATCATTTGAGACTTCTACTCATGTATGTTTGATTACTGACTTCTGTCAAGGGGGAGAGTTGTTTGCATTGCTTGACAAGCAACCCATGAAACTTTTTAACGAAGAATCTGCAAGGTTCTATGCTGCAGAAGTTGTCATTGGTTTGGAGTATCTCCACTGTTTAGGCATAATTTATAGAGACTTGAAGCCTGAAAATATCTTACTTCAGAAGGATGGTCATGTTGTACTAACTGATTTTGATCTATCATTTATGACATCTTCTAAACCTCAGGTTGTGAAGCATCCTCTACCGAGTAAGCGAAGAAAATCACGGAGTCAACCTACACCGACATTTGTTGCAGAGCCAGTTTCACAATCAAACTCATTTGTTGGAACTGAAGAATACATAGCTCCTGAAATTATAACTGGAGCTGGGCATACTAGTGCCATAGATTGGTGGACTTTAGGTATCTTGTTGTATGAGATGCTCTATGGTCGGACGCCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCGAGCAGTATCCCGGCAAGTCTGCAAGCCAGGCAACTGATTAATGCACTGTTGCAAAGAGACCCGGGAAGTCGACTAGGTTCAACTACTGGTTCCAATGAAATCAAACAACATCCGTTTTTTCGCGGAATCAATTGGCCTTTAATCCGCAACATGAGTCCACCTCCTTTAGATGTTCCTCTTACATTGATAGGAAAAGATCCATTGGCCAAGGATGTGAAGTGGGAAGATGATGGGGTGCTTGTTAGCAAGATTGATGATATTGATGTTTTTTGA 3006 0.4195 MENLNLPANSDPDASSDRSGSFRVFEPSTSQDVGQTSSRREQNVTEAVRLDGRSTNASSNSAGSRGESVSKWMAFATESGFDDSNSKMKFLSGDKNIAKDKTLRTGQNGKSSSDHKQVSTEASIAERTAEWGVVANLDSFKTSFDGDRIKKLSDRFVESTRTSGESSYESESSSGVIPRVSQELKEALETLQQTFVVSDATKPDCPIMYASTGFFSMTGYSSKEIIGRNCRFLQGPDTDKNEVAKIRDATRNGKTYCGRLLNYKKNGTPFWNLLTITPIKDDHGNTIKFIGMQVEVSKYTEGLNENVLRPNGLPKSLIRYDARQKETALCSMTEVVQTVKDPKSIIRARIDDTATKNEEQEKPNFDFVLPKSVETGHTSLPGRQPSPLNIQGDISRMSSTQDRKSKSSRISGRTPSLSFKGKSLSSVRGEEEKPIVEPEVLMTKEIERSESLDRSQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDMSTVDKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLQNRLSERAELQSSKLVKATAVNVDEAVRELPDANLRPEDLWAIHSKPVFPLPHKRDNPSWVAIQKIAARDKTIGLHNFVPMRPLGCGDTGSVHLVELQGTGELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFETSTHVCLITDFCQGGELFALLDKQPMKLFNEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSFMTSSKPQVVKHPLPSKRRKSRSQPTPTFVAEPVSQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLQARQLINALLQRDPGSRLGSTTGSNEIKQHPFFRGINWPLIRNMSPPPLDVPLTLIGKDPLAKDVKWEDDGVLVSKIDDIDVF 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1761 1001 MobiDBLite consensus disorder prediction 1 67 - -
Lal16g1761 1001 Pfam Protein kinase domain 667 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1761 1001 Pfam PAS domain 201 297 IPR000014 -
Lal16g1761 1001 Pfam PAS domain 486 578 IPR000014 -
Lal16g1761 1001 Gene3D Transferase(Phosphotransferase) domain 1 748 965 - -
Lal16g1761 1001 Gene3D PAS domain 452 616 - -
Lal16g1761 1001 SMART serkin_6 664 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1761 1001 PANTHER FLIPPASE KINASE 1-RELATED 397 1001 - -
Lal16g1761 1001 PANTHER FLIPPASE KINASE 1-RELATED 136 388 - -
Lal16g1761 1001 MobiDBLite consensus disorder prediction 820 841 - -
Lal16g1761 1001 CDD PAS 207 296 IPR000014 -
Lal16g1761 1001 SUPERFAMILY PYP-like sensor domain (PAS domain) 201 293 IPR035965 -
Lal16g1761 1001 MobiDBLite consensus disorder prediction 1 68 - -
Lal16g1761 1001 PANTHER BNAA02G07840D PROTEIN 397 1001 - -
Lal16g1761 1001 PANTHER BNAA02G07840D PROTEIN 136 388 - -
Lal16g1761 1001 ProSiteProfiles PAC domain profile. 254 308 IPR000700 -
Lal16g1761 1001 ProSiteProfiles PAS repeat profile. 463 536 IPR000014 -
Lal16g1761 1001 SMART pas_2 182 251 IPR000014 -
Lal16g1761 1001 SMART pas_2 465 534 IPR000014 -
Lal16g1761 1001 Gene3D Phosphorylase Kinase; domain 1 663 747 - -
Lal16g1761 1001 SUPERFAMILY PYP-like sensor domain (PAS domain) 482 578 IPR035965 -
Lal16g1761 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Lal16g1761 1001 MobiDBLite consensus disorder prediction 351 365 - -
Lal16g1761 1001 MobiDBLite consensus disorder prediction 377 398 - -
Lal16g1761 1001 ProSiteProfiles Protein kinase domain profile. 664 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1761 1001 MobiDBLite consensus disorder prediction 102 123 - -
Lal16g1761 1001 ProSiteProfiles PAC domain profile. 537 591 IPR000700 -
Lal16g1761 1001 CDD PAS 486 578 IPR000014 -
Lal16g1761 1001 ProSiteProfiles PAS repeat profile. 180 253 IPR000014 -
Lal16g1761 1001 SUPERFAMILY Protein kinase-like (PK-like) 640 977 IPR011009 -
Lal16g1761 1001 TIGRFAM sensory_box: PAS domain S-box protein 187 297 IPR000014 -
Lal16g1761 1001 TIGRFAM sensory_box: PAS domain S-box protein 489 581 IPR000014 -
Lal16g1761 1001 SMART pac_2 540 582 IPR001610 -
Lal16g1761 1001 SMART pac_2 257 299 IPR001610 -
Lal16g1761 1001 ProSitePatterns Protein kinases ATP-binding region signature. 670 693 IPR017441 GO:0005524
Lal16g1761 1001 MobiDBLite consensus disorder prediction 351 433 - -
Lal16g1761 1001 CDD STKc_phototropin_like 662 970 - -
Lal16g1761 1001 Gene3D PAS domain 194 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1761 Lal-Chr16 16647670 16664211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1761 106 1001 AGC Kinase Gene Family AT5G58140 72.937 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal16g1761 Pkinase 2.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1761 K20715 - gmx:100820096 1556.96