Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1750 ATGGATGAGATCAGACCTAGAAATGAAACTGAGAAGATGTCTCAGTCAAGAGACATGGCTGCATCAATGTCAACAATTGGTTTGGGATGGTGTCCTTATGTGTCACAGGGTGAAGGAAGAGCTGCTACTTTTGAAAAGAAGTCACAAAAGTTTCGTGTCGATGCGAGGAAGCCTTTGGTGGCAAGATTGACCAAGGACATAGTTGAGACATACCAAATATGCAATCCACAGTTTAAATACTCTGAAGATCTAAATCCAAAAAGATTTTTGACTAGCCCATCAACTGGAGTACTTAACGATGGCTATGATAATGTGAACTCGGATCTTATTCTGACAGTGAATCTTGTCTTGATCCATTTAGAGAAAAATAGAAGATATATTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTTGCTAAATGCCTGGATTCAGATACCAACAGTATTGTTGCTGTGAAGATCATTAAAAACCAGCCTGCATACTATCAACAGGCACGGGTTGAAGTAACTATTTTAACAACGTTAAATAAAAAGTTTGATCCTGAGGATAAGCACCACATTGTTCGTATATATGATTATTTTGTATATCAACAACATTTGTGCATATGCTTTGAACTTCTGGACACAAACTTATATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTAGTATTGTTCAGTTGTTCTCTAAGCAGATTCTCTGTGGACTGGATCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCTGAAAACATTCTTTTATGTACAAGCACCATGAAGCCCGCTGAAATCAAGATAATTGACTTTGGGTCAGCATGCATGGAAAACCATACTGTTTATTCCTATATTCAGAGTCGATACTACAGATCGCCTGAGGTTCTTCTTGGATATCAATACACAACAGATATTGATATGTGGTCCTTCGGGTGCATAGTAGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAATTTGATCTTTTGAGGCGGATGATTAAAATACTTGGAGGACAACCACCTGATTATGTATTGAGGGAGGCCAAAAACACAAGTAAATTCTTTAAGTGTATCGGCAGTCTCCAGAACATAGACAAAAGTGAGAGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACGGAGGATGAATATGAAGCTAGAGATTTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAGTCATATGAATCTTGAAGCAATTGTTACAAACTATCCGTATAGGAAAAACCTACCCAAGGAAGATATTCTCAAAGAGAGTCAAATACGATTGGCTCTTATTGATTTTCTGAGAGGGCTTGTTGAACTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAAACACCCTTTCGTAACCGGGGAACCTTTTACACAGCCTTACAAGCCTTCCCCTAAGACACCTCGTATGCCGGTAGTTCAAAATATCAAGGTCGATAATCACCCAGGTGGAGGGCATTGGTTTGCTGCTGGTCTATCACCTAATGTTCCAGGCAATAACAGAGTTTCCCAATATAGCATTCCGCATTTTCAGATGGTGCAATATCCACCTGCTAATAGTTATGGCAGTGTAGGAAGCCATGGAAGCTATAATGATAATATTGGTCATGCAAGCAGCTATGGAAGTTATGGAGATAACAGTAACATGTTTGCTTACTATTCACCTGTTGGTCCATCTGGTATGCACATGCACAACCATGGAAGTATGTCAATGCTGGGAAATACTCCTGATGCTCGGAGGAGACTGAAGTATCAACCTACGAGCGGACTAGGTATAAGTCCATCAGCCGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGTCCATCTCAATTTACTCCACCAAGTTCCTATTGTCAGATGTCAAGTTCTCCAGGACACTACGGACCTACATCTCCGGCAAGAGGAGCTTCTCATGGATCATCTTTAGGGAAGTCGGCTGCAGTTAGCCAGTTCAACAGAAGAAATAATTGGGGGGGATATTCTGCAAGTCCTCAAACTCAAGAAACAACATTTTCTTCACATTTCCAAGCTCAATCTCATGATGGCTCAAGCCATGGTGAGGGAACATCACAAGCTTTTGGCAGTTCACCATCTTATTTGCAGTCAAATGTTAATCCCGGAAACTGGAAGCAGCGAGGAAGTGGAGGGATATATGCTAATCAGAACATGAACTTGCAATCAACAGAATTGGCTCATGACAATGCCGAGGCACGTTTATCGTTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAGCTTCTCCTGCAAGAGGATGGTTCAGATGAAAGCTCCTTGACAACCGAGTTTGGAAGAAGTATGAATCTTGGTTCCTCTGAACCATGGGTTGGACTAGGAAGGTTCAACCACATCTCTAGCACAAGCTCTCCACTAATCATTCAGAGACAAAATGGACCAAGTCAAACATTTTCTAATATAGAGATGAATAGCCCTCCAACACATGATATTCAAGCAGCATATAACATACCTTCTATGTCAAAGCCATTACATCTTATGCCTCCTCATATTTCACAAAATTCTCCGAGCCGTTTCCGACAGCAATCTGTTGAAAGATTCACACATGGTAGACCCCGTCATGGTGGTGGTGATTGGAACCAAATTAAGGTTCAAGCTCCTTCTTCTGGATTCAGCAGTGTTGGCCAACATTCTCCCAGGAATAACTCATTCACCAATAGTATGACATGGGGGAGAAGAATGAATCCTGCAGTATCAAGCTTACCATCAACAACATCTCATACAAGAAATGATTATGCAAGGATAAACTAG 2841 0.4111 MDEIRPRNETEKMSQSRDMAASMSTIGLGWCPYVSQGEGRAATFEKKSQKFRVDARKPLVARLTKDIVETYQICNPQFKYSEDLNPKRFLTSPSTGVLNDGYDNVNSDLILTVNLVLIHLEKNRRYIVKDVLGHGTFGQVAKCLDSDTNSIVAVKIIKNQPAYYQQARVEVTILTTLNKKFDPEDKHHIVRIYDYFVYQQHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLDLLKEAGIIHCDLKPENILLCTSTMKPAEIKIIDFGSACMENHTVYSYIQSRYYRSPEVLLGYQYTTDIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIKILGGQPPDYVLREAKNTSKFFKCIGSLQNIDKSESSKNGRSVYQALTEDEYEARDLKKPSIGKEYFSHMNLEAIVTNYPYRKNLPKEDILKESQIRLALIDFLRGLVELDPAKRWSPFQASKHPFVTGEPFTQPYKPSPKTPRMPVVQNIKVDNHPGGGHWFAAGLSPNVPGNNRVSQYSIPHFQMVQYPPANSYGSVGSHGSYNDNIGHASSYGSYGDNSNMFAYYSPVGPSGMHMHNHGSMSMLGNTPDARRRLKYQPTSGLGISPSAGNFAPLPLGASPSQFTPPSSYCQMSSSPGHYGPTSPARGASHGSSLGKSAAVSQFNRRNNWGGYSASPQTQETTFSSHFQAQSHDGSSHGEGTSQAFGSSPSYLQSNVNPGNWKQRGSGGIYANQNMNLQSTELAHDNAEARLSLPDPGDWDPNYSDELLLQEDGSDESSLTTEFGRSMNLGSSEPWVGLGRFNHISSTSSPLIIQRQNGPSQTFSNIEMNSPPTHDIQAAYNIPSMSKPLHLMPPHISQNSPSRFRQQSVERFTHGRPRHGGGDWNQIKVQAPSSGFSSVGQHSPRNNSFTNSMTWGRRMNPAVSSLPSTTSHTRNDYARIN 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1750 946 Pfam Protein kinase domain 127 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1750 946 MobiDBLite consensus disorder prediction 626 732 - -
Lal16g1750 946 PANTHER DUAL SPECIFICITY PROTEIN KINASE 56 891 - -
Lal16g1750 946 Gene3D Transferase(Phosphotransferase) domain 1 207 470 - -
Lal16g1750 946 Coils Coil 735 755 - -
Lal16g1750 946 MobiDBLite consensus disorder prediction 618 732 - -
Lal16g1750 946 SMART serkin_6 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1750 946 MobiDBLite consensus disorder prediction 898 946 - -
Lal16g1750 946 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Lal16g1750 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Lal16g1750 946 CDD PKc_YAK1 126 469 - -
Lal16g1750 946 SUPERFAMILY Protein kinase-like (PK-like) 120 491 IPR011009 -
Lal16g1750 946 Gene3D Phosphorylase Kinase; domain 1 90 206 - -
Lal16g1750 946 ProSiteProfiles Protein kinase domain profile. 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1750 946 PANTHER BNAC04G29850D PROTEIN 56 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1750 Lal-Chr16 16520169 16539021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1750 125 355 MAP Kinase Gene Family AT3G18040 33.333 2.85e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Lal16g1750 Pkinase 8.1e-52 CL0016