Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1696 ATGAAGGAGAAGAAAGCGAAAACAAACACGGAAATAGTCCAAATGGAATGGATGATGGCAAATTACAGAAAAGAATACCTTCCATGCGACAACGATGATGTATTGTCACCAACGGGTGTGTTCGAGGTTCCTATTTCAGACAGCAGTGGAAGCAGCAATTGCAGCAGCATTAGCTCGCCCGGGAAGTTATCGCCAACGGAGATGCAGCCGCGTTCGCAGTGGAAGGATGGGTATAGCCAGCAATGGAAGGCCATGATTGATGGATTGAGGTTCAAGTCTGTTAGAAGATTCTCAACCATTCCTCTGCTTGCAGCCAGCTATGAGATTTCGAGAAAAAATATGCGAAAGAAGTTGTCTCGTATTCGAGCCAGCAATGATGATGATTATGTTGATGACATTGATCTTGAGAATTTTCCTACAAAGCCTTCTTGGAAGAATTTCACTTATGATGAACTTGCTACTGCAACAGATGATTTTAGCTCAGAAAACTTGGTTGGAAAAGGTGGAAATGCTGAAGTCTACAAAGGATGCTTACCAGATGGACAAGTTGTAGCAGTAAAGAGGCTAATGAAGAATGAAAAAGAAGCTCAGGATAGAGCCGGTGATTTCTTATCGGAGCTTGGGATTATTGCTCATGTAAACCATCCGAACGCAACACACCTGATGGGGTTTGGGATCGACCGCGGCCTCTACTTTGTCTTACAATTCTCCCCTCATGGAAGCCTTGCTTGTTTGCTCTTTGATGCTGAATGCTTGGAGTGGAAGATAAGGTTCAAGGTAGCTATGGGGGTAGCAAAAGGATTGCAATATCTTCATCAAGATTGTCCAAGAAGAATCATTCACAGAGACATCACAGCTTCAAATATTTTACTCAACCATAATTTTGAAGCTGAGATTTCAGATTTTGGATTGGCGAAGTGGCTCCCGGATAAGTGGGCTCACCATGTTGTCTTCCCTATAGAAGGCACATTCGGGTATTTGGCTCCCGAGTACTTCATGCATGGAATTGTGGATGAAAAGACCGACGTTTTCGCATTTGGGGTTTTGCTATTGGAGCTGTTAACAGGTCGTCGTGCCGTTGATTCAAATAGTAGGCAAAGTCTTGTGATATGGGCCAAGCCACTGCTGGACGCGATGGAGGTCAAGGAAATAGCAGATCCCAGATTAGAAGGCAAATATGATCTCGTAGAAATGAACCGAGCCATGGCAACGGCTTCCATGTGTGTCCATCACATGTCCTCCAAGAGGCCATTCATGAATCAGGTTCTGAAGCTTCTGAACGGCGAAGAGGTGGCTGTCGAGTTCAGCAAAAAATCGATGAACCCAAGATCACTCTTGTTAGATGCATGTGACTTAGAAGACTACACATGTTCTAACTATTTGAACGACCTCAATCGCCACAAGGAATTAATCATGGAGTAA 1422 0.4409 MKEKKAKTNTEIVQMEWMMANYRKEYLPCDNDDVLSPTGVFEVPISDSSGSSNCSSISSPGKLSPTEMQPRSQWKDGYSQQWKAMIDGLRFKSVRRFSTIPLLAASYEISRKNMRKKLSRIRASNDDDYVDDIDLENFPTKPSWKNFTYDELATATDDFSSENLVGKGGNAEVYKGCLPDGQVVAVKRLMKNEKEAQDRAGDFLSELGIIAHVNHPNATHLMGFGIDRGLYFVLQFSPHGSLACLLFDAECLEWKIRFKVAMGVAKGLQYLHQDCPRRIIHRDITASNILLNHNFEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELLTGRRAVDSNSRQSLVIWAKPLLDAMEVKEIADPRLEGKYDLVEMNRAMATASMCVHHMSSKRPFMNQVLKLLNGEEVAVEFSKKSMNPRSLLLDACDLEDYTCSNYLNDLNRHKELIME 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1696 473 Pfam Protein kinase domain 161 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1696 473 Gene3D Transferase(Phosphotransferase) domain 1 238 443 - -
Lal16g1696 473 Gene3D Phosphorylase Kinase; domain 1 132 234 - -
Lal16g1696 473 MobiDBLite consensus disorder prediction 46 73 - -
Lal16g1696 473 PANTHER OS08G0249100 PROTEIN 1 473 - -
Lal16g1696 473 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Lal16g1696 473 ProSiteProfiles Protein kinase domain profile. 159 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1696 473 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 473 - -
Lal16g1696 473 SUPERFAMILY Protein kinase-like (PK-like) 139 426 IPR011009 -
Lal16g1696 473 ProSitePatterns Tyrosine protein kinases specific active-site signature. 279 291 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1696 Lal-Chr16 15944381 15949272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1696 147 422 Trihelix Transcription Factor Family AT1G68690 46.233 5.22e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal16g1696 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1696 - - gmx:100794225 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0433 15 2960126 2965638 Lal16g1696 16 15944381 15949272 PCT
Lal16g1696 16 15944381 15949272 Lal15g0433 15 2960126 2965638 PCT