Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1680 ATGGCGAAGAAGCAGAAATCATCATCATCAGCTCCTCTTCTTCCTCCATCTCGCGATGAAATTTCATCAGATCAACAACAAAATCATTCTCATGATTCCGAAGATGCTTCTTCCGATGATCAATTTCTTCAACCACCTTCGAAAATTCCTCAATTCGATTCAGAATCTGATTCCGATTCCGATACTCCTCCTCTTCCTCTTTCAATCTCCAAATCCATTCCATCGAAGCCAATTGATACATCCTCATTGAAACGCCCTGCAAATGATAATGATTCGAAAAGGGTAAAGAAGAAAGGATCATATGAATCGGAGGAAGATGCGAAGAAAACCGTTGTCGATTCGAAGAAATTGTTTCAGAGGCTGTGGAGTGAGGAAGATGAAATTGCTATACTTAAAGGTATTGTTGAATTTACTTCAAAAACTGGAAAGGATCCTTATAAATATGCTGAAGCTTTTTATGAATTCGTTAAGAAATCGCTTCATGTTGAGGCGTCTAGTAATCAATTGAAGGAGAAGATTAGAAGGTTGAAGAGGAAATTTGAGAACAATGCTAATAGAGGGAAGAATGGTGAGGACCCTAATTTTTCTAAACAATTTGATCGTGAAACATTCGAGTTGTCGAAGAAGGTTTGGGGCAATGCAGGATCTGGAGGAGGGGAAAAAGTGGTAAAAGGTAAGTCTGATGGGAAGGTTGTCAATAGTCAGAAGAAGGAATTAGCTGGAGGTATAGATGTTGCTCCACCGAAACCAAAACCTGAATTGAAATTGGATTCGAGATCGGTTGATTTAAATAAAGATGTAAAGATGGACATTGATGTTGTGACTGATACAAGTTCGTATTTATTGGAAGTGATTCGAGTTACCAAGGGTGTTGGGTTGAGTGAGGTGAATGAAGAGGTGGTGAAGAGAGGAATAGAGTTAATTGGAGCATCCGAGAGGAAAGAATTGGAGGAGGAGTGGAAGGAACTTCAAGCTGCTGAATTCGAGCTTTCTGTCAAGCGTGTAGAACTAATCGCTAATCATGCTAGGTTGATTTTGGAGGCCTACAAGTCATCAAACCATTAA 1065 0.3962 MAKKQKSSSSAPLLPPSRDEISSDQQQNHSHDSEDASSDDQFLQPPSKIPQFDSESDSDSDTPPLPLSISKSIPSKPIDTSSLKRPANDNDSKRVKKKGSYESEEDAKKTVVDSKKLFQRLWSEEDEIAILKGIVEFTSKTGKDPYKYAEAFYEFVKKSLHVEASSNQLKEKIRRLKRKFENNANRGKNGEDPNFSKQFDRETFELSKKVWGNAGSGGGEKVVKGKSDGKVVNSQKKELAGGIDVAPPKPKPELKLDSRSVDLNKDVKMDIDVVTDTSSYLLEVIRVTKGVGLSEVNEEVVKRGIELIGASERKELEEEWKELQAAEFELSVKRVELIANHARLILEAYKSSNH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1680 354 PANTHER BNAANNG10740D PROTEIN-RELATED 24 353 IPR007592 GO:0006355
Lal16g1680 354 MobiDBLite consensus disorder prediction 39 85 - -
Lal16g1680 354 Coils Coil 166 186 - -
Lal16g1680 354 Pfam Protein of unknown function, DUF573 118 212 IPR007592 GO:0006355
Lal16g1680 354 PANTHER STOREKEEPER PROTEIN-LIKE 24 353 - -
Lal16g1680 354 MobiDBLite consensus disorder prediction 86 109 - -
Lal16g1680 354 MobiDBLite consensus disorder prediction 24 38 - -
Lal16g1680 354 MobiDBLite consensus disorder prediction 1 23 - -
Lal16g1680 354 MobiDBLite consensus disorder prediction 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1680 Lal-Chr16 15753305 15754369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1680 62 351 GeBP Transcription Factor Family AT4G25210 34.416 2.07e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lal16g1680 DUF573 6.3e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1680 - - lang:109344950 523.472