Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1670 ATGGAAGTAGAATTCCAAGCATATACCAATGAATCTCAACAACAAAAATTTGCTATTCCTGTAGATTCTGAGCACAAAGCCACTGAATTTAGATTGTTTTCGATATCGAAACCGCATATGCGAGCATTTCATCTATCATGGGTGTCTTTCTTTTCATGTTTTGTGTCTAGTTTTGCAGTTCCTCCACTCATACCTATAATTCGCGACAACCTCAATCTTACTGCTACTGACATTGGAAATGCTGGTGTTGCCTCAGTTTCTGGTGCTGTTTTTGCTAGAATTGCAATGGGAACTGCTTGTGATTTAGTTGGACCGCGCCTTGCCTCGACCTCTCTTATACTCCTTACAGCACCAGCAGTTTACTTCACTTCGATAATTTCATCGCCGACTTCCTTTCTACTAGTTCGCTTCTTTACTGGCTTCTCTTTAGCAACTTTTGTCTCCACGCAATTCTGGATGAGCTCTATGTTTTCTGCTCCTGTTGTTGGTTCAGCCAATGGATTTTCAGGTGGATGGGGTAACCTTGGAGGAGGGGCTACCCAACTGATCATGCCTCTTGTGTTTTCGCTCATTCGCGATATCGGTGCTACGAAGTTCACAGCATGGCGAATCGCGTTCTTTGTTCCTGCATTTTTTCAAATGCTGACAGCATTTTCCATACTGATATTAGGCCAAGACATGCCAGATGGGAATTTCCAAGGCCTAAAAAAGACGGGCGAAAAATCGAAAGACGAATTCTCAAGAGTCCTGTATAATGGTATTACAAATTACAGAGGGTGGATTCTAGCATTGACTTATGGATATTGCTTTGGAGTAGAGTTAACTATAGATAACATCATAGCTGAATACTTCTATGACAGATTCAATCTCAAACTCCACATAGCCGGAATCATCGCGGCGAGTTTCGGCTTGGCTAACATATTTTCTAGGCCTGCAGGAGGATTGATATCAGATGCAATGGGAAAGAGGTTTGGAATGAGGGGTAGGCTTTGGGCCTTATGGCTTTGCCAAACCTTAGGAGGAGTGTTCTGCATAATCCTTGGTTTGGTTGGTTCTTTAAGTGTATCCATTGTTGTTATGATCATATTTTCTTTGTTTGTTCAAGCTTCATGTGGAATGACTTTTGGAGTTGTTCCTTTTGTCTCAAGAAGGTCATTAGGGGTGATTTCTGGGATGACAGGAGGTGGAGGCAATGTAGGTGCAGTATTGACACAAGTAATTTTCTTCAAAGGATCAACATTTTCAAAAGAAAGAGGAATAACTCTAATGGGTGTTATGATAATAATATGCACACTACCATTATTCTCAATATATTTTCCACAATGGGGTGGTATGGTTTTTGGTCCATCATCTGAAAAGGTTTCAGAGGAAGATTACTACTTAGCTGAGTGGAACTCAAAGGAGAAGGACAAAGGGTCCCATCATTCAAGTTTGAAATTTGCTGAAAATTGCAAAAGTGAAAGAGGCAGAAAAGTTAACACTTCAACCATTTCTTCTGATGAAGTTGCACCACAAAATATTTGA 1524 0.4068 MEVEFQAYTNESQQQKFAIPVDSEHKATEFRLFSISKPHMRAFHLSWVSFFSCFVSSFAVPPLIPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASTSLILLTAPAVYFTSIISSPTSFLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGFSGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAFFQMLTAFSILILGQDMPDGNFQGLKKTGEKSKDEFSRVLYNGITNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHIAGIIAASFGLANIFSRPAGGLISDAMGKRFGMRGRLWALWLCQTLGGVFCIILGLVGSLSVSIVVMIIFSLFVQASCGMTFGVVPFVSRRSLGVISGMTGGGGNVGAVLTQVIFFKGSTFSKERGITLMGVMIIICTLPLFSIYFPQWGGMVFGPSSEKVSEEDYYLAEWNSKEKDKGSHHSSLKFAENCKSERGRKVNTSTISSDEVAPQNI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1670 507 Pfam Major Facilitator Superfamily 48 403 IPR011701 GO:0022857|GO:0055085
Lal16g1670 507 CDD MFS_NRT2_like 43 436 IPR044772 GO:0015112
Lal16g1670 507 MobiDBLite consensus disorder prediction 490 507 - -
Lal16g1670 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 493 IPR044772 GO:0015112
Lal16g1670 507 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 1 493 - -
Lal16g1670 507 MobiDBLite consensus disorder prediction 467 507 - -
Lal16g1670 507 SUPERFAMILY MFS general substrate transporter 28 437 IPR036259 -
Lal16g1670 507 MobiDBLite consensus disorder prediction 467 489 - -
Lal16g1670 507 Gene3D MFS general substrate transporter like domains 34 231 IPR036259 -
Lal16g1670 507 Gene3D MFS general substrate transporter like domains 243 442 IPR036259 -
Lal16g1670 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 436 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1670 Lal-Chr16 15633733 15636920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1670 15 494 Inorganic Solute Cotransporters AT1G12940 73.542 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1670 K02575 - gmx:100787888 828.935