Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1547 ATGGGAACTGGGGAAGAGAGCACAGCTAAACCTTCTAAATCATCTTCATCAACCCATGAAATACCAACAGCACCTTCATATCCTGATTGGTCGAGCTCCATGCAGGTGGCTTATTATGCTCCTGGAGCCGCACCACCTCCCTTTTATGCTTCAACCGTTGCTTCCCCAACTCCCCACCCCTATATGTGGGGAAGCCAGCATCCCTTAATGCCACCATATGGGACTCCAGTTCCATATGCAGCTATGTACCCTCCTGGGAGTGTCTATGCTCATCCTAGAATGGCAATGACTCCAAATGCTATGCAGCACAGTACAGAGTTTGAAGTGAGAGGACCTGATGGAAAAGATCGGAATTCAGCCAAAAAATTGAAAGGAGTGTCTGCAAAAACAGGTTCCAAAGCAGGAGAGAGTGGAAAGACAGGCTCAGGTTCAGCAAATGATGGCAACTCACAAAGTGCTGAAAGTGATTCAGAGGATTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGGTTCAGCTGCAAACAGGAAGGGAAGCTTTAACCAGATGCTTGTTGAAGGAGCCAATGCACAGAATAACACTGCTGGTGCCATTTCTCAATCTTCTGTGCCTGGAAACCCTGTTGTCTCAATGCCTGGAACTAATCTTAATATTGGAATGGAATTATGGAATGCATCTTCTGCAGGTGCAGAATCTTCAAAAATGAGACATAATCAATCTGGTGCCCCCGGAGCTGTTGCTCCGTCAACCATTATTGGAGCTGATCAATGGATGCAGCCGGATGAGCGTGAGCTGAAAAGACAGAAGAGGAAACAATCTAACAGAGAGTCGGCTAGGAGGTCAAGGCTGCGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGACACTTGGAGGTGAGAATCAAACTCTCCGAGAAGAGCTTCGGACACTTTCCGAGGAATGCGAGAAGCTTACATCTGAAAATAATTCTATGAAGGAAGAGTTGGAAAGGTTGTGTGGCCAAGAAGCAGTTGCTAACCTTTGA 1035 0.4647 MGTGEESTAKPSKSSSSTHEIPTAPSYPDWSSSMQVAYYAPGAAPPPFYASTVASPTPHPYMWGSQHPLMPPYGTPVPYAAMYPPGSVYAHPRMAMTPNAMQHSTEFEVRGPDGKDRNSAKKLKGVSAKTGSKAGESGKTGSGSANDGNSQSAESDSEDSSNASDENTNQQGSAANRKGSFNQMLVEGANAQNNTAGAISQSSVPGNPVVSMPGTNLNIGMELWNASSAGAESSKMRHNQSGAPGAVAPSTIIGADQWMQPDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGGENQTLREELRTLSEECEKLTSENNSMKEELERLCGQEAVANL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1547 344 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Lal16g1547 344 MobiDBLite consensus disorder prediction 105 176 - -
Lal16g1547 344 PANTHER G-BOX-BINDING FACTOR 1 1 344 - -
Lal16g1547 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 270 285 IPR004827 GO:0003700|GO:0006355
Lal16g1547 344 MobiDBLite consensus disorder prediction 230 246 - -
Lal16g1547 344 CDD bZIP_plant_GBF1 268 318 IPR045314 GO:0003700|GO:0006355
Lal16g1547 344 MobiDBLite consensus disorder prediction 230 256 - -
Lal16g1547 344 Coils Coil 276 338 - -
Lal16g1547 344 SMART brlzneu 263 327 IPR004827 GO:0003700|GO:0006355
Lal16g1547 344 MobiDBLite consensus disorder prediction 108 123 - -
Lal16g1547 344 SUPERFAMILY Leucine zipper domain 266 322 IPR046347 GO:0003700|GO:0006355
Lal16g1547 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 265 328 IPR004827 GO:0003700|GO:0006355
Lal16g1547 344 Pfam bZIP transcription factor 263 325 IPR004827 GO:0003700|GO:0006355
Lal16g1547 344 Gene3D - 266 320 - -
Lal16g1547 344 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 344 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal16g1547 344 MobiDBLite consensus disorder prediction 133 176 - -
Lal16g1547 344 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1547 Lal-Chr16 12774151 12782696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1547 1 344 bZIP Transcription Factor Family AT4G36730 53.468 6.95e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal16g1547 MFMR 8e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1547 16 12774151 12782696 Lal16g1547 16 12774151 12782696 ECH