Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1511 ATGCATCTCTTTCCCTTCATCCTTATCTTCACTTTCACCATATCATTTAGCTTCTATATGATTCTGGGTCAGCAACCTTACATTGGTGTAGCCACAAGTGCATGTTTTGAAAAGGGTAACTTAAACTCAATTCTTGGTTATACTTGTTCTGAAGTAAATCCTAGTTGCCAAGCTTACCTAACCTTCAGAGCTCAACCCCTTTATAACTCTATTCCTTCAATATCTAAGTTGTTGGGTTCTGACCCATTAAAGATTTCTGAAGCAAACTCAGTTTCTGAAGAAACAACCTTTGAAACAAACAAGTTGGTGATTGTTCCAATCAATTGTTCTTGTGTTGGTGATAAGTATTATCAGTTCAACACATCCTTTGTAGTAAGAAATAATGATAACTATTTTGGGATTGCTAACAACACTTTTGAAGGGCTTTCAACATGTCAAGCACTTCTGGATCAAAACCACATTCCTAATGTAGATCTATATGTTGGAACAAAACTTGTAGTTCCTCTTAGATGTGCTTGTCCTTCAAAGAATCAAACTGAGGAAGGTGTCAAGTACTTAATAAGTTACTTAGTAGAATTTGGTGATGATGTTTATCAAGTTAGTGAAAGATTTGGTGTTACAATTGATACAATTCTTGAAGCTAATTCACTTTCTTTGCAACAACCCACCATCAATCCCTTTACTACCCTTCTAGTACCCCTTCAAGATAAGCCTTCCAGTTCTCAAACCGTTGAGCCGCCTCTGCCTCCACCTCCTCCACCACCGCCACCGCAACCTTCCTCAAATGGAAGCTCAAGCAAAACATGGGTCTATATAGTTGTTGGAGTTGTTGGAGCCTTTGTCTTAATATTACTTATCTGCTCCATCATTGTTAGGAAACACTACCTTACTCAGAAGAGAATGGACTCTGAGTCCGTGTCGAATAATTTCGCGGCGAAGGAGAAGGCACAAGGGAAGGAATTAGAGGAAGAATCTAAAAAATTATCAGAGATCATATCGGGAATAGCTCAATCTTTCAAGGTGTATAGTTTCGAGGAACTACAGAATGCAACAAATAATTTTAGTCCTAAATGCCTTATCAAAGGGTCTGTTTATGAAGGCATTATCAATGGCGATTCGGCTGCAATTAAAAAGATAGATGGAGATGTGTCAAAAGAGATAGAACTATTGAACAAAGTGAATCATTCTAATGTAATTCGCCTTTCCGGGGTTAGCTTCAAAGATGGACATTGGTATCTTGTTTATGAGTATGCTGCAAATGGAGCATTGAGTGATTGGATCTACTTTAACAACAATGATGAGAATAAGTCTCTAAGTTGGACTCAAAGAATACAAATTGCATTAGATGTAGCCACAGGACTTGATTATCTTCACAGTTTAATTTCTCCACCCTATATACACAAGGATCTAAAGTGTAGTAACATTCTTTTGGACATTGATTTCAGGGCAAAGATTGCAAACTTTGGCTTTGCAAGGTCATTGGAATTGGAAAATGACCAAAATGCCATGACAAGACATATTGTTGGGACAAGAGGTTACATGGCTCCAGAGTATTTGGAAAATGGTTTGGTATCTACAAAACTTGATGTGTATGCATTTGGGGTTATGATGTTGGAAATCCTAAGTGGAAAAGAAGTTTTTGCTTTATATGAAGAAAGTGATTTCAATTTATCTAGTGTTGTACAAGGTGAACATGAGAGGTTAAGGGACTTAATGGATTCTTCACTGCAGGGAAATTATCCATTGGAACTTGCTATATTTGTAGGTGGAATGATTGATGATTGTATGAAGAAAGATCCAACAACTCGTCCTTCCATGAATGAAATTGTGACATCTTTGTCTAAAGCCTTTGATTCTTCATTGAGCTGGGAACAATCCGTGAACAGATACCATAACTTTAGTTAG 1905 0.3732 MHLFPFILIFTFTISFSFYMILGQQPYIGVATSACFEKGNLNSILGYTCSEVNPSCQAYLTFRAQPLYNSIPSISKLLGSDPLKISEANSVSEETTFETNKLVIVPINCSCVGDKYYQFNTSFVVRNNDNYFGIANNTFEGLSTCQALLDQNHIPNVDLYVGTKLVVPLRCACPSKNQTEEGVKYLISYLVEFGDDVYQVSERFGVTIDTILEANSLSLQQPTINPFTTLLVPLQDKPSSSQTVEPPLPPPPPPPPPQPSSNGSSSKTWVYIVVGVVGAFVLILLICSIIVRKHYLTQKRMDSESVSNNFAAKEKAQGKELEEESKKLSEIISGIAQSFKVYSFEELQNATNNFSPKCLIKGSVYEGIINGDSAAIKKIDGDVSKEIELLNKVNHSNVIRLSGVSFKDGHWYLVYEYAANGALSDWIYFNNNDENKSLSWTQRIQIALDVATGLDYLHSLISPPYIHKDLKCSNILLDIDFRAKIANFGFARSLELENDQNAMTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVMMLEILSGKEVFALYEESDFNLSSVVQGEHERLRDLMDSSLQGNYPLELAIFVGGMIDDCMKKDPTTRPSMNEIVTSLSKAFDSSLSWEQSVNRYHNFS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1511 634 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 1 628 - -
Lal16g1511 634 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 628 - -
Lal16g1511 634 Gene3D Phosphorylase Kinase; domain 1 322 417 - -
Lal16g1511 634 SUPERFAMILY Protein kinase-like (PK-like) 336 613 IPR011009 -
Lal16g1511 634 SMART serkin_6 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1511 634 MobiDBLite consensus disorder prediction 237 262 - -
Lal16g1511 634 SUPERFAMILY LysM domain 187 233 IPR036779 -
Lal16g1511 634 Gene3D Transferase(Phosphotransferase) domain 1 419 630 - -
Lal16g1511 634 Gene3D LysM domain 118 176 IPR036779 -
Lal16g1511 634 Coils Coil 311 331 - -
Lal16g1511 634 Gene3D LysM domain 177 246 IPR036779 -
Lal16g1511 634 SMART LysM_2 122 168 IPR018392 -
Lal16g1511 634 SMART LysM_2 188 233 IPR018392 -
Lal16g1511 634 Pfam Protein kinase domain 372 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1511 634 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Lal16g1511 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Lal16g1511 634 MobiDBLite consensus disorder prediction 243 261 - -
Lal16g1511 634 CDD LysM 187 232 IPR018392 -
Lal16g1511 634 ProSiteProfiles Protein kinase domain profile. 295 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1511 634 Pfam LysM domain 189 233 IPR018392 -
Lal16g1511 634 Pfam LysM domain 124 168 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1511 Lal-Chr16 12056257 12058161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1511 14 626 Receptor kinase-like Gene Family AT2G23770 43.444 1.32e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal16g1511 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1511 - - aip:107626052 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1511 16 12056257 12058161 Lal16g1511 16 12056257 12058161 ECH