Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1468 ATGGAAGTGCTTCCCTGCTCGGGTGTTCAGCGTGCTGGGGAATCTGATTGCCCTCAGGAGAGTTCGGAAACAGCTTTTGCGTACCAGAGAGGACCAAATTGCCCTGAAAATGTTGAACTAGTTAAATTGGATGATCGACCAAATGACCCATTATGTAACATGGAAGGGCTCCAGATTGAAGGACAAGGCCAAGGGCAACAAACTGCTTTTGAACTATTGACTAATTCAGATTGTCAATGCCGTGAGGCTTCATGTTTTGACTGTCAAGTAGAAGACCAAAATGAATCCGGTAGTTTTGATGATGAGATAAATGAACATTGCTTAACCTCTCATAACCCTTGCTCTATTATGGATACATTTGAAGGTGAATCACCAAAAGATAGCGGGGAAGGAGAGTTGTCATTTTCTGAACCCACTTGGCTGAAAGGGGATGAATCTTTGGCATTGTGGGTCAAGTGGAGGGGAATGTGGCAAGTCGGCATCCGATGTGCAAGGGCTGACTGGCCATTATCAACTTTGAAAGCAAAACCAACTCATGACCGGAAGAAATACTTTGTCATATTTTTTCCTAAAACAAGGAATTATTCTTGGGCTGATATGATGCTTGTTCGATCAATTAATGAGTTTCCTCAGCCTATTGCGTATAAAAATCATAAGGCAGGATTGAAAATGGTGAAAGACTTAACTGTTGCACGGCGGTTTATAATGCAAAAGCTAGCTGTCGGCATGCTGAACATTGTTGACCAGCTTCATTCTAATGCTTTGATAGAAACTGCTCGTGATGTGATGGTTTGGAAGGAATTTGCTATGGAGGCTTCTCGTTGTGATGGTTATTCTGATTTTGGCAGAATGCTTCTAAAGCTGCAAAATAGCATAATGCAGCACTACATCAATGCCGATTGGATACAACATTCTTCTCAGTCTTGGTTTGAACGATGCCAGAATGCACATAGTGCTGAATCAGTAGAGCTGCTGAAGGAGTGCTTGATTCAAGGTGCACCGCTCAAAGCCGGAGCTTATAGCATCAAGTTGCCCATTTTAGGGAAGACCCATGGCAGCTACCAATTCCGTCTGGGGTCCCTGGAATTTTTCTTTTATCCTTTCATGTTTTTCCCTTGCACTAGCATCGACCCTCCTCAGCTGCCAAATTTGTATTTTGAGAAGATTAAGGATATTCTTTTATCTTGCATAATTCCTCCTTTGAGAGATCATGAATTGTTCGATTCTATTTTGTGGAATGTTGTCAATACACTCGGGGATGCAGTGGTGCAACCAACAATAAGTTCTGTTTGGAAAACCTGGAAGCATGATGTAATGAAATTGTTTTCCGCATTTCCTTCCATATCTAGCTACAAGGAGAGGCAGCAGCAGACCCCTGATGGTTTGTACCAAGTCAGTCTTCAGGCCGGAAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGAGACACATGCTTCACCAGTGGAGATGAAGGGTTTAGGTCACTCTATTACTCTTGAGACTGACCCTGGTTTCTTTAAGAATCAAGACAGATTGAGTTCATTGGTAGCTGAGACTTCCAAACAGGCATATTTTGGGGAGGTGCCTATAGAATCTGATTCACCTAATAGTTTGACCAATAAATGGAATACAATTATAGCTGAGGCTGTAGATTCCAATATTTTGCATACAGATGGAATGGAACTAACGCCTGTGAATGAAATGGCGGGTAAAAAAGTTGTTGAATCTGGTACTAAGAATCAACAATGTATAGCTTATATTGAAGCCAAAGGAAGACAGTGTGTGAGATTGTCTATTGATGATGATGTATACTGTTGTGTGCATTCTCGTTATTTGGGCAGCTTAGCAAAAACTGAAAAACCTGTTTCAGTTGATACTCCAATATGTGATGGTACCACAGTTCTTGGCACTAGATGTAAGCATCATGCCCTTCCTGGATTTTCGTTCTGTAAGAAACATCGGCCTCATGCTGAAACAGGTAAGGCCTCTAATTTAATCCATAATACACTAAAGAGGAAACATGAAGAAAATTACTATGGTTCCGAGGGCTTGTTTTGCAAAGACTTGGTACTGGTAAATGTGGAAAGTCCATTGCAAGTAGTACCAGTGTCAGTAATTGGAGGTGATTCTTTCCATGGACAAAGTAACTTACATGATAAGCCCATTCATCGCGGCAATGGTCATAATGCAATGGAGGCACTTCACTGTATAGGCTCTCCTTCCTATAATGACAAGGACCGATGTTTGGAGGCTCCAAATTGGTATTCCTTGTACTGTGAAATGCACCTTCCAAGCTGGCTTAAACGTGCAAAAAATGCAAAGAGCAGGATAATATCAAAAGAAGTGTTCACAGAACTTCTAAGGGACTGTCACTCATGGGAGCAAAAGATACATCTGCATAAAGCATGTGAAATTTTTTACAGGCTATTCAAAAGCATTTTACCACAAAGAAAACCAGCTCCTAAGGAAGAAATATTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCTAGTGTTGAAGAAATGTTTACAAAGCTGGTTCATAGTGAAAAGGAAAGTCTCAAATTGATTTGGGGTTTCAATGATGAAATAGATGCATCCCCATCAGTGGAAGGACTGCTTCTCCTTCCCTCCACAATTAATGACAACTTTGATGATGAGAATGCCATTAAGTGTAAGATCTGCTCTGCACAATTTCCTGATAACCAAACACTCGGTAACCATTGGATGGACAATCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGTTATGCTTGTGCCATTTGTCTGGATTCTTTCACAAACAAGAAACTATTGGAAACTCATGTTCAGGAGAGACATCGTGTGCAGTTTGTTGAACAGTGCTTGCTTCTCCAATGTATTCCTTGTGGTAGTCATTTTGGAAATATGGAGGAATTATGGCTGCATGTTCTATCAGTTCACCCTGTTGAATTTAAACGATCAAAAGCTCCTGACAAGCAAATTTTGTCTACTATTGAGGAGGAGTCTCCAAAACAACCTGAGCAGGGAAATTCAGTTTCTTTAGAGAATAATTATGAGTATCCAGGTGGTACTCGGAAGTTCGTTTGCAGGTTTTGCGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGCCACCATCAAGCTGCTCATATGGGGCGCAATCTAGTTAGCAACCGCCCTGCAAAGAAGAAAGTTCATTATTATTCGCATAGATTAAAATCTGGAAGACTTGGCCGTCCTAGATTTAAAAACGGTCTGGCTGCTGCATCATATAGGATCAGTAAGGCTAATGCAAATTTGGAGACGAGTATTGAAACTATAAAATCACTTGACAAAGGAGAAAAAACCATACATTCACAAGGAGCTGAGACTGAAAATATATTGGAAGAATATCAATGCTCAGCAGTTGCAAAGGTTTTGTTTTCTGAGATTCATAAGACTAAGCCTAGGCCTAACAATCTTGATATTTTATCCATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTAAAGCCTCACTGGAGGAGAAATATGGAATTTTGCCTGAAGGGCTCTATTTGAAGGCAGCAAAACTTTGCGGTGAGCATAACATTCTAGTGAACTGGCACCAGGATGGATTCATTTGTTCTAGAGGTTGTAAGGTATTGAAGGACCAAACATTTCCCTTGGCATCTCTTTCGAATGGTTACCCAAGGCGAAAATCAGTAAGTTTATCAGAACCTATGACTGAAGAGTTGGAGGTTGATGAGTTTCACTACATCATCAATTCAAACCAGTTAAAATTTGGGTCCTCGCAAAAGGGCGTAGTCTTATGTGATGATCTAAGCTTTAGGAAGGAATCAATTCCAATTATTTGTGTGGTAGATGAAGAAATTCTAAATTCACAAATGCAGGGGGCTAATGAGAAAGATAGTAATCTTTTTAGGCCCTGGGAGAGCTTTACCTATATTACAAAGCCAATGCTTGATCCATCCCTCAATCTTACTTCTGAGAGTCTGCAACTGGGATGTGCTTGCTCAGTTTCTACCTGCAGTCCTGAAAGATGTGATCATGTATACCTTTTTGATAGTGACTATGATGATTCAAAAGATATCTTTGGGAAACCAATGCGTGGTAGATGCGATAAAACCTGTCCAAACAGAATATTGCAGAACGGAGTACGAGTAAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGAGCTGGTGAGGCTATCATGCGTGGCACATTTGTGTGCGAGTACATTGGGGAGGTTTTAGACGAGCAGGAGGCACACAATAGGCGCAAGAGATATGGCAAAGAAAATTGCAGTTATTTGTATGACATTAACGGTCATGTCAATGATATGAGTCGATTGATCGAAGGACAGGCCAAATATGTCATTGATTCTACTATATATGGAAACGTCTCTAGCTGCTCACCCAATCTTGTGAGTCACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCTTGCACATATTGGTCTTTATGCGAGTCGAGATATTGCTTTGGGTGAAGAACTGACATTTAATTATCATTACGAGCTTGTGCCCGGAGAGGGAACTCCTTGCCTTTGCGGATCTTTAAACTGCCGAGGACGCCTTTACTAG 4620 0.4106 MEVLPCSGVQRAGESDCPQESSETAFAYQRGPNCPENVELVKLDDRPNDPLCNMEGLQIEGQGQGQQTAFELLTNSDCQCREASCFDCQVEDQNESGSFDDEINEHCLTSHNPCSIMDTFEGESPKDSGEGELSFSEPTWLKGDESLALWVKWRGMWQVGIRCARADWPLSTLKAKPTHDRKKYFVIFFPKTRNYSWADMMLVRSINEFPQPIAYKNHKAGLKMVKDLTVARRFIMQKLAVGMLNIVDQLHSNALIETARDVMVWKEFAMEASRCDGYSDFGRMLLKLQNSIMQHYINADWIQHSSQSWFERCQNAHSAESVELLKECLIQGAPLKAGAYSIKLPILGKTHGSYQFRLGSLEFFFYPFMFFPCTSIDPPQLPNLYFEKIKDILLSCIIPPLRDHELFDSILWNVVNTLGDAVVQPTISSVWKTWKHDVMKLFSAFPSISSYKERQQQTPDGLYQVSLQAGRKRPKLEVRRAETHASPVEMKGLGHSITLETDPGFFKNQDRLSSLVAETSKQAYFGEVPIESDSPNSLTNKWNTIIAEAVDSNILHTDGMELTPVNEMAGKKVVESGTKNQQCIAYIEAKGRQCVRLSIDDDVYCCVHSRYLGSLAKTEKPVSVDTPICDGTTVLGTRCKHHALPGFSFCKKHRPHAETGKASNLIHNTLKRKHEENYYGSEGLFCKDLVLVNVESPLQVVPVSVIGGDSFHGQSNLHDKPIHRGNGHNAMEALHCIGSPSYNDKDRCLEAPNWYSLYCEMHLPSWLKRAKNAKSRIISKEVFTELLRDCHSWEQKIHLHKACEIFYRLFKSILPQRKPAPKEEIFQWALTEASKDSSVEEMFTKLVHSEKESLKLIWGFNDEIDASPSVEGLLLLPSTINDNFDDENAIKCKICSAQFPDNQTLGNHWMDNHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHRVQFVEQCLLLQCIPCGSHFGNMEELWLHVLSVHPVEFKRSKAPDKQILSTIEEESPKQPEQGNSVSLENNYEYPGGTRKFVCRFCGLKFDLLPDLGRHHQAAHMGRNLVSNRPAKKKVHYYSHRLKSGRLGRPRFKNGLAAASYRISKANANLETSIETIKSLDKGEKTIHSQGAETENILEEYQCSAVAKVLFSEIHKTKPRPNNLDILSIARSACCKVSLKASLEEKYGILPEGLYLKAAKLCGEHNILVNWHQDGFICSRGCKVLKDQTFPLASLSNGYPRRKSVSLSEPMTEELEVDEFHYIINSNQLKFGSSQKGVVLCDDLSFRKESIPIICVVDEEILNSQMQGANEKDSNLFRPWESFTYITKPMLDPSLNLTSESLQLGCACSVSTCSPERCDHVYLFDSDYDDSKDIFGKPMRGRCDKTCPNRILQNGVRVKLEVFKTEKKGWAVRAGEAIMRGTFVCEYIGEVLDEQEAHNRRKRYGKENCSYLYDINGHVNDMSRLIEGQAKYVIDSTIYGNVSSCSPNLVSHQVLVESMDCELAHIGLYASRDIALGEELTFNYHYELVPGEGTPCLCGSLNCRGRLY 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1468 1539 ProSiteProfiles SET domain profile. 1389 1516 IPR001214 GO:0005515
Lal16g1468 1539 ProSiteProfiles Zinc finger C2H2 type domain profile. 1028 1056 IPR013087 -
Lal16g1468 1539 Pfam SET domain 1400 1515 IPR001214 GO:0005515
Lal16g1468 1539 Pfam Zinc finger C2H2-type, 3 repeats 926 1052 IPR040689 -
Lal16g1468 1539 SMART set_7 1389 1522 IPR001214 GO:0005515
Lal16g1468 1539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 404 1539 - -
Lal16g1468 1539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 331 - -
Lal16g1468 1539 Gene3D Classic Zinc Finger 885 955 - -
Lal16g1468 1539 ProSitePatterns Zinc finger C2H2 type domain signature. 1030 1051 IPR013087 -
Lal16g1468 1539 SUPERFAMILY SET domain 1265 1529 IPR046341 -
Lal16g1468 1539 ProSiteProfiles Post-SET domain profile. 1523 1539 IPR003616 -
Lal16g1468 1539 MobiDBLite consensus disorder prediction 1000 1016 - -
Lal16g1468 1539 ProSitePatterns Zinc finger C2H2 type domain signature. 892 913 IPR013087 -
Lal16g1468 1539 ProSiteProfiles Zinc finger C2H2 type domain profile. 924 947 IPR013087 -
Lal16g1468 1539 MobiDBLite consensus disorder prediction 1 22 - -
Lal16g1468 1539 Gene3D SET domain 1261 1539 IPR046341 -
Lal16g1468 1539 SMART c2h2final6 1028 1051 IPR013087 -
Lal16g1468 1539 SMART c2h2final6 890 913 IPR013087 -
Lal16g1468 1539 SMART c2h2final6 924 947 IPR013087 -
Lal16g1468 1539 SMART c2h2final6 958 981 IPR013087 -
Lal16g1468 1539 ProSitePatterns Zinc finger C2H2 type domain signature. 960 981 IPR013087 -
Lal16g1468 1539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 331 - -
Lal16g1468 1539 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 404 1539 - -
Lal16g1468 1539 MobiDBLite consensus disorder prediction 997 1016 - -
Lal16g1468 1539 ProSitePatterns Zinc finger C2H2 type domain signature. 926 947 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1468 Lal-Chr16 11605027 11618310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1468 128 327 C2H2 Transcription Factor Family AT2G23740 66.000 2.38e-81 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal16g1468 zf-C2H2_3rep 4.4e-66 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1468 - - lang:109347097 2114.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1468 16 11605027 11618310 Lal16g1468 16 11605027 11618310 ECH