Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1462 ATGTTTCATCACCAAACAAAGTTTGCTATTGTCTTCACAATTTTTATGTTCTACTCAACAAAAGCCAAAAACAACAACTGCCAGAGAAATTGTGGAGAACATTCCCTAAAGTACCCTTTTGGATTCTCTTCTGGGTGTGAAATCCAACTTAACTGTACAAAAAGCAAACAAGTACAAATAGGAGAGTTAAAAGTCCAAAATCTAACTTCTGACAGCATATACATTAGTTTACCTGCTAAATGCAACCGTAGCATAAGTTTCATAGACCCACTTTTCGGTAAAAACTTCGCTCCAACACGGAAGAACAGTTTTCTAGTACAAGGTTGTTCATCTAGTCTTGGAGGCTGTGTTATTCCAACATCAATTTTCATTGGTAGCTTGATGTTGGAAGGGTGTGAACATAAAAGAAGTGATGAAATGAATTGTTTAACGATGTTGAAGGGTAAAGATGTTACGATGATGACACATGAGGAATTGAAGGGAAGTGAGTGCAAGTTTTTGTTTTCTGCTATTGCTGTTGATAAGAGCAAAGAGCTTTCGTTGCAGTTTCAAGTAGTTGAGTTGGGGTGGTGGCTTGAAGGACCTTGTCATTGCTCCGATAATGAGACTTGTACAGTGGTTCATCTTGCCGGAGGAAAACAAGGGTTCCGTTGCCACTGCCGTGAAGGTTTCGCCGGAGATGGGTTCATGAACGGCACCGGTTGCCGGAAAGTTTCTCATTGCAATGCTTCAACACTGAACTCTGGGGAATGTGGGATAGCAATCAAAATTGGAGTCCTTGTTGGAGTGATCATTGTTGGAGCTTCCCTGGTGGCTGCTCTGTCTCTTCTATCTTACTTTACCAAGCGTCGTTCTACTTGGCTGAGAAAACAAATGACGATAAAGCGCCTATTAAGAGAAGCTGCAGGAAACTCTAGTGTTCCTCTCTACCCCTACAAGGAAATTGAAAGAGCCACAGATTCATTCTCTGAGAAACATAGACTGGGAACTGGTGCTTTCGGCACAGTTTATGCTGGAAATCTTCACAATGATGAATGGGTTGCTGTAAAAAAGATTAAGTATAGGGACACCAATAGTGTTGATCAAGTCATGAATGAGATCAAGCTCGTTTCTTCGGTCAGTCACCCGAATTTAGTGCGCCTCCTAGGTTGCTGTATAGAGGATAGAGAGCAGATACTCGTTTACGAGTATATGCCAAATGGAACACTGTCTCAACATTTGCAAAGAGAGAGGGGTGGAATCCTACCATGGACAATAAGACTCACTATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCTGCAATTGATCCTCCAATTTACCATAGAGATATTAAATCTAGTAATATACTCTTGGACTATAGTTTTCAATCGAAAGTCGCAGATTTTGGACTTTCTAGGCTTGGCATGACAGAAAATTCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTTGATCCCGAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTCTATAGCTTCGGAGTGGTTTTGTTAGAGATAATAACAGCCATGAAAGTGATTGATTTTGCTAGACCTCAGAGTGAGATTAATTTGGCTGCACTTGCTGTTGATAAGATTAGGAAGGGTTGTGTAGATGAGATCATAGATCCTTTCCTTGAACCACATAGGGATGCTTGGACACTCAATTCTGTTCACAAAGTGGCTGAGCTAGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAAGAGCTAGAACAAATCAGACGGATTGGATTGGAAACTATGGAGGAAACTGTATGTGTGACACATCACGTCTTGAACCAAACCTTAAGGCATTAG 1869 0.4114 MFHHQTKFAIVFTIFMFYSTKAKNNNCQRNCGEHSLKYPFGFSSGCEIQLNCTKSKQVQIGELKVQNLTSDSIYISLPAKCNRSISFIDPLFGKNFAPTRKNSFLVQGCSSSLGGCVIPTSIFIGSLMLEGCEHKRSDEMNCLTMLKGKDVTMMTHEELKGSECKFLFSAIAVDKSKELSLQFQVVELGWWLEGPCHCSDNETCTVVHLAGGKQGFRCHCREGFAGDGFMNGTGCRKVSHCNASTLNSGECGIAIKIGVLVGVIIVGASLVAALSLLSYFTKRRSTWLRKQMTIKRLLREAAGNSSVPLYPYKEIERATDSFSEKHRLGTGAFGTVYAGNLHNDEWVAVKKIKYRDTNSVDQVMNEIKLVSSVSHPNLVRLLGCCIEDREQILVYEYMPNGTLSQHLQRERGGILPWTIRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMTENSHISTAPQGTPGYVDPEYHQNFHLSDKSDVYSFGVVLLEIITAMKVIDFARPQSEINLAALAVDKIRKGCVDEIIDPFLEPHRDAWTLNSVHKVAELAFRCLAFHSDMRPTMMEVAEELEQIRRIGLETMEETVCVTHHVLNQTLRH 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1462 622 SUPERFAMILY Protein kinase-like (PK-like) 303 595 IPR011009 -
Lal16g1462 622 Gene3D Transferase(Phosphotransferase) domain 1 398 614 - -
Lal16g1462 622 ProSiteProfiles Protein kinase domain profile. 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1462 622 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 614 - -
Lal16g1462 622 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 614 IPR045274 GO:0007166
Lal16g1462 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lal16g1462 622 Pfam Protein kinase domain 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1462 622 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Lal16g1462 622 SMART serkin_6 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1462 622 Gene3D Phosphorylase Kinase; domain 1 282 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1462 Lal-Chr16 11532194 11540705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1462 1 601 Receptor kinase-like Gene Family AT2G23450 56.494 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal16g1462 Pkinase 9.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1462 - - lja:Lj4g3v0867570.1 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0147 15 1030710 1035992 Lal16g1462 16 11532194 11540705 PCT
Lal16g1462 16 11532194 11540705 Lal15g0147 15 1030710 1035992 PCT