Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1454 ATGGGAGGAATCAAATTTTACAATGACGTGATTCCATTCATTGTAATAGTTGCAACAGAGGGAATACTTGTTGGTATTAATGTTTTATACAAAGCAGCTTCACTAAAGGGAATGAGTTACTATGTCTTAATCGTTTATTCATATTCAGTCTCTACTTTGATACTTTTTTTCCCAATGTACTTCGTTCATAAAAGGTCAATAGGACTTCCTCCATTCAACGCCTCTATATTCTTCAGAATTGTCCTCCTTGCAGCATTTGGATTCGGAGCTGAACTTTGTGGAGACAAAGGAACTCAATACACTTCACCTACACTTTCTTCTACTCTTAGCATCCTTGTACCCATTTTTACCTTTATACTTTCTGTACTTTTTAGTATGGAGAAAGTAGCTTTAAGAAGCAAAAGCACTCAGGCCAAAATCCTTGGTACTTTATTGTCGATATCAGGTGCACTCACAGTTGTTCTATATAAGGGTCACACAATTTTATTCTCAAATTCAAATCCACTACAATTACATGCAACTGATTCTCTAATTAGCTTATCTTCACCAAGAAATTGGGTTCTTGGCGGATCACTAATTGTTCTTCAGTATCTTCTACTTTCAATAATTTTCATTCTTCAGGGAATATTTAACGCATGCCTTAGTAGTCTAGTTTACGTTTGGGCTGTTCGTCTTAAAGGCCCTTTATACGTATCAATCTTTAAACCTGCATCAATAGTCATTGCTGCCACTTTGAGTGTTATATTCCTTGGTGACTCGCTATATTTGGGAACTGTTTTTGGAGCAATGATACTATCATTAGGGTTGTATGCTGTTATATGGGGGAAATCAAGGGAACAAGAAATGAGTGAGGAATTTGAGGAAGGTATAACTGAACCTCTACCCAATAGTAAGACTCCATTGTTGAAGGACAGCAACGTAAAAAATAACAGCAAAATCATGTACACCAATTGTCCATAA 960 0.3625 MGGIKFYNDVIPFIVIVATEGILVGINVLYKAASLKGMSYYVLIVYSYSVSTLILFFPMYFVHKRSIGLPPFNASIFFRIVLLAAFGFGAELCGDKGTQYTSPTLSSTLSILVPIFTFILSVLFSMEKVALRSKSTQAKILGTLLSISGALTVVLYKGHTILFSNSNPLQLHATDSLISLSSPRNWVLGGSLIVLQYLLLSIIFILQGIFNACLSSLVYVWAVRLKGPLYVSIFKPASIVIAATLSVIFLGDSLYLGTVFGAMILSLGLYAVIWGKSREQEMSEEFEEGITEPLPNSKTPLLKDSNVKNNSKIMYTNCP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1454 319 PANTHER WAT1-RELATED PROTEIN 10 206 IPR030184 GO:0016021|GO:0022857
Lal16g1454 319 PANTHER WAT1-RELATED PROTEIN 208 282 IPR030184 GO:0016021|GO:0022857
Lal16g1454 319 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 158 - -
Lal16g1454 319 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 279 - -
Lal16g1454 319 PANTHER WAT1-RELATED PROTEIN 208 282 - -
Lal16g1454 319 PANTHER WAT1-RELATED PROTEIN 10 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1454 Lal-Chr16 11424078 11428301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1454 6 313 Nodulin-like Gene Family AT5G40230 39.617 9.09e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1454 - - mtr:MTR_1g014510 271.166