Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1448 ATGGCGAGATGGCAATTTTACAATGATGTGCTTCCATTCGTTGCAATAGTTGCAATAGAATGCATAATTGTTGGTGTTAATGTTCTATACAAAGCAGCTACACTAAAGGGTTTGAGTTACTATGTCTTCATTGTTTATTCATTTTCAGTCTCTTCTATTGTACTTCTTTTCCCCCTCTCCTTCGTCCTCAAAAGGTCAAGAGGACTTCCTCCATTCAAGGTCTCTATATTCTTCAAAATTTTCCTCCTTGCAGCACTTGGATTTGTAGCTGAACTTTGTGGAGTCAAAGGAATTCAATATGCTTCACCTACTCTTTCTTCTACTCTTAGCATCCTCGTACCTGCTTTTACTTTCGTACTTGCTGTATCGTTTAGGATGGAGAAACTAGCTCTAAGAAGCAAAAGCACTCAGGCCAAAATCTTTGGTACTATATTGTCGATAATAGGTGCACTCATAGTTGTTCTATATAAGGGTCGCACACTTTTATCAGATGAAAATCCGCTACAAGCACCTGCAACTCATTCTCTAGTTAGCTCATTATCACAAAGTAAATGGGTTATTGGTGGATCACTACTTGTTGTTGATTATCTTCTGGTTCCAATAATGTACATTCTTCAGGCTAGTATTATGAATCAATATCCATCAGAGGTTATTGTGGTCTTCACATTCTGTGTGTGTATGACTTGCATATCTGCACCAATATGCTTACTATTAGAACCAAACTGGAGTGCTTGGAAGATAACTCCTGATATAAGATTGGTCGCTATTTTATGTTGGGGAATATTGATCACATGCCTTAGTTCTGTGGTTTATGCTTGGGGTCTTCATCTTAAAGGCCCTGTATACATATCAATCTTTAAACCTGCATCAATAGTCATTGCTGCCACATTGAGTGTTATATTCCTTGGTGACGCGCTACATTTTGGGACTGTTCTTGGAGCAGTGATACTATCATTAGGGTTTTATGCTGTTATATGGGGGAAAGCACAGGAGGAGGAAATGAGTGAGGAGATTGAGGAAGGTATAACTGAATCTCTACCCAATAGTAAGACTCCTTTGTTGAAGGACAGCAACGTAAAAAATAACAGCGAAATCATGTACACCAATTGTCCATAA 1116 0.3853 MARWQFYNDVLPFVAIVAIECIIVGVNVLYKAATLKGLSYYVFIVYSFSVSSIVLLFPLSFVLKRSRGLPPFKVSIFFKIFLLAALGFVAELCGVKGIQYASPTLSSTLSILVPAFTFVLAVSFRMEKLALRSKSTQAKIFGTILSIIGALIVVLYKGRTLLSDENPLQAPATHSLVSSLSQSKWVIGGSLLVVDYLLVPIMYILQASIMNQYPSEVIVVFTFCVCMTCISAPICLLLEPNWSAWKITPDIRLVAILCWGILITCLSSVVYAWGLHLKGPVYISIFKPASIVIAATLSVIFLGDALHFGTVLGAVILSLGFYAVIWGKAQEEEMSEEIEEGITESLPNSKTPLLKDSNVKNNSEIMYTNCP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1448 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Lal16g1448 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 329 - -
Lal16g1448 371 Pfam EamA-like transporter family 201 325 IPR000620 GO:0016020|GO:0016021
Lal16g1448 371 PANTHER WAT1-RELATED PROTEIN 8 332 - -
Lal16g1448 371 ProSitePatterns Profilin signature. 1 9 IPR027310 GO:0003779
Lal16g1448 371 PANTHER WAT1-RELATED PROTEIN 8 332 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1448 Lal-Chr16 11329011 11333122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1448 4 365 Nodulin-like Gene Family AT5G40230 50.137 7.06e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1448 - - lang:109359378 442.965