Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1419 ATGGCAATGGTTGCAGATGCTCTAGTTGGAGCTTTGGTTGGGGAACTCCTGAATGCAGTTTTGCAAATCAAAGACAAGGCTATTCAATTCCGACCGACCCTGGAACGGTTGGAGTTCACACTCAAATCGTTAGAACCCGTGATCAACGAGATAGAGAATTTGAACAAGCAATTGGATAGGCCAAAGGAGGAAACTGAGAGTTTGATCAAGCAGATGAAGAAAGGGAAGGATCTTGTTCTCGAATGTGCTGAAGTCCGTTGGTGGAAATTCTGTTGCATGGCTAACTACCAAGATGAACTTCAAGAATTGGATGAGTCGATTCTTCGATTTTTTCAATTAGATATGCAAGGCCATACGCGGAGAGATGGGGCAGAGACCTTGGTGGAGGTGAAAATGATTCACACTGAAATTAAGAAACTGAACTTAGGTACTAGAAATGATAGGATGGAACTAAAGGGCTTGTGTTCCCCTCCTGAACCACCCGAGTTTATTGTTGGGTTGGATGTTACTATGAGGGAGTTGAAGCTGAAGTTGCTGCAGGATCAGGTTGGTGGCTCAGTAATCAATGTGACCGGTGCAGGAGGTTCGGGCAAGACCACATTAGCTAAAATGATATGTTGGGATGACCAAGTCCGAGGTATATTCAATACGAACATCTTCTTCATCACCTTTGCAAAAACACCCAAGTTGAACTCCATTGTGCAGAAACTGTTTCAACACACTGACTACCAGGTTCCCGAGCTTGAAAGTGACGAAGACGCGGTTAACCAATTGGAACATTTGCTAAAACAGATTGGGAAAAGCCCAATTCTGTTGGTCCTGGATGATGTTTGGCCTGGATCGGAATCTCTTATTGACAATTTTGTGTTCAAGATCACAGGCTACAAGATTTTAGTGACATCAAGATTCGCTATCGAAAGATTTAGTACTCCATACATCTTGAAACCTCTTGGTGAACAAGATGCTATAAAGCTTTTTCACCACTCAGCATCCCTGACTCATATCAGCTCTGATGTTCCTGATGATGTTGTAAAAGAGATAGTGAGAGGCTGCAGTGGTTCTCCCTTGGCACTTAGAGTGAGTGGAAGATCACTAAGTCATCAGAATCCAGTGATCTGGCACAACAGGGCGAGGGAATTGTCTAAGGGACATTCAATTCTCGACTCTAGTAACGACGTACTTGTTTCTCTCCAGAAAAACTTCGATGTTTTAGACCCTAAGGTGATCGAGTGTTTCCGGGACCTATCCTTATTCCCTGAAGACCAGAGGATCCCTGCCTCTGCCCTTGTTGATATGTGGGCAGAACTGCATGGATATGATGATGAGAGTGCAATGGAGAAAATTTACCAATTGGTCAATCTTAACATGGCTGATATTGTTGTGACAAGGAAAGTTGCAAGTGGTACAATTAACTGCAATTATCACTACGTCACGCAGCACGATCTTCTTCGCGATCTAGCTATTCGTCAAACTAGTCAAAAGCCGGTGGCGCTGAGGAATAGAGTAATTATTGATTCAAATGATAATAGTCTTCCTAAATGGTGGACTCAAGAGAAAGAGTGTACTATTAAAGCCAGCATATTATCAATATCAACAGATGAAAAGTTCACTTCTAACTTGCAGCCAACTGAAGTTGAGGTTCTAGTGTTGAACCTTCGCGCGAAGAAGTTCGCGCTACCAATGTTCATGAAGAAAATGAGTAAATTGAATGTTTTGATAATCACAAACTATGATTTCTATCATACTGAGTTAGAGAGTTTTGAGTTGCTTCATTATCTATCCGATCTTAAAAGAATCAGATTGGAGAAGGTTTCGATTCCTTTCTTCAGCGACAGTGGATCGCAATTGAAGAATCTGCAGAAGTTATCTCTTTTTATGTGCAATGTTAATGAAGCATTTAAAGATAGCACTGTCCAAGTTTCAGATATGCTTCCAAATTTGGTCGAAATGAACTTCGACTACTGCAATATGGTGGAATTGCCTGTTGGAATCTCTAACATGGTCTTCTTAAAGAAGATCAGTATCACAAACTGCCATAAACTTACTACGCTTCCTAACGGAATCGGAAATCTGGTCAATTTGGAATCACTATGGCTTAGTTCCTGTACTAGTTTAAAAACGTTGCCAGACTCAGTCGCCAGACTTTGTAGCTTAAAACTTCTTGATATCTCTGGCTGCATAAGCCTTTATGCATTGCCTGAGAAAATGGGGGGTTTGCATAATTTAGAGAAGCTCAATGTTAGAGGCTCAAAATTAAGCAACTTGGGACCTTTAATCATGGACCTAGAAGGCTTAAGGCATTTGTTGTGTGATGAAGAGACAAAGGAGTTATTGGAACCTTTCACTTACATCCTTAGTAGTCTAAGGCTAGAGGTAATCCAATCTGATGACAACTTAAATTGGCTTTTCTGA 2412 0.4129 MAMVADALVGALVGELLNAVLQIKDKAIQFRPTLERLEFTLKSLEPVINEIENLNKQLDRPKEETESLIKQMKKGKDLVLECAEVRWWKFCCMANYQDELQELDESILRFFQLDMQGHTRRDGAETLVEVKMIHTEIKKLNLGTRNDRMELKGLCSPPEPPEFIVGLDVTMRELKLKLLQDQVGGSVINVTGAGGSGKTTLAKMICWDDQVRGIFNTNIFFITFAKTPKLNSIVQKLFQHTDYQVPELESDEDAVNQLEHLLKQIGKSPILLVLDDVWPGSESLIDNFVFKITGYKILVTSRFAIERFSTPYILKPLGEQDAIKLFHHSASLTHISSDVPDDVVKEIVRGCSGSPLALRVSGRSLSHQNPVIWHNRARELSKGHSILDSSNDVLVSLQKNFDVLDPKVIECFRDLSLFPEDQRIPASALVDMWAELHGYDDESAMEKIYQLVNLNMADIVVTRKVASGTINCNYHYVTQHDLLRDLAIRQTSQKPVALRNRVIIDSNDNSLPKWWTQEKECTIKASILSISTDEKFTSNLQPTEVEVLVLNLRAKKFALPMFMKKMSKLNVLIITNYDFYHTELESFELLHYLSDLKRIRLEKVSIPFFSDSGSQLKNLQKLSLFMCNVNEAFKDSTVQVSDMLPNLVEMNFDYCNMVELPVGISNMVFLKKISITNCHKLTTLPNGIGNLVNLESLWLSSCTSLKTLPDSVARLCSLKLLDISGCISLYALPEKMGGLHNLEKLNVRGSKLSNLGPLIMDLEGLRHLLCDEETKELLEPFTYILSSLRLEVIQSDDNLNWLF 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1419 803 Gene3D - 401 490 IPR036388 -
Lal16g1419 803 PRINTS Disease resistance protein signature 187 202 - -
Lal16g1419 803 PRINTS Disease resistance protein signature 264 278 - -
Lal16g1419 803 PRINTS Disease resistance protein signature 351 365 - -
Lal16g1419 803 PRINTS Disease resistance protein signature 713 729 - -
Lal16g1419 803 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 802 - -
Lal16g1419 803 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 138 IPR008808 -
Lal16g1419 803 Gene3D - 317 400 IPR042197 -
Lal16g1419 803 Coils Coil 51 71 - -
Lal16g1419 803 Gene3D - 153 308 IPR027417 -
Lal16g1419 803 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 802 IPR039203 GO:0050832
Lal16g1419 803 Gene3D Ribonuclease Inhibitor 503 782 IPR032675 -
Lal16g1419 803 SUPERFAMILY RNI-like 549 771 - -
Lal16g1419 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 415 IPR027417 -
Lal16g1419 803 Pfam NB-ARC domain 170 370 IPR002182 GO:0043531
Lal16g1419 803 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1419 Lal-Chr16 10964174 10968802 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1419 188 769 WRKY Transcription Factor Family AT5G45050 22.910 9.55e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1419 - - gmx:100812310 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1419 16 10964174 10968802 Lal16g1419 16 10964174 10968802 ECH
Lal15g1071 15 9156575 9165548 Lal16g1419 16 10964174 10968802 LSH