Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1417 ATGGGAAGGAGCATACAAATTGATGAGAACGCAGAATTCAATGTTCAACTGGATGGACCTTTGTTGAAGCTAAAGAACGATGAAACATGCTCTATATATTGGTCCAATACTGAAGAATCTGAAGCTGATATTCTGATTTTAAATGTTCATACTAATCAGTATTCCTTTCCAGAAATCATAAACCAAATGAGTAAAATAAAATTCTCTATTTCTTCCTTCATATCATTGAAGAATTTAAAAAAGTTATCCCTCTACATGTGTAATATGAATCAAGCTTTTGAAACTAACACAACCCTAATTTCAGATACACTTCCAAATCTAGTGGAATTAAGTATTGATTATTGCAAAGATATAGTAGAATTGCCTAATGGGGTGTGTAATTTTACCCATTTAGTGAACCTCACTATTACTAATTGCCACAAATTTTCTTCACTGCCCAAAGAAATTGGAAAGTTGGAAAATTTGGAACTCCTAAGACTTAGTTCTTGTACTGATTTTGAATTGTTGCCAGATTCTATTGTAAGGCTTTCAAATCTTAGGCTTCTTGACATTTCAAAATGCATAAGCCTTCAAAGTTTACCAAAGGATATTGGTAATTTGTCTAATCTAAGAAGCCTCTACATGGAAAATTGTTCAAGGTGTGAGTTGCCATACTCAGTCATCAATTTTGAGAATTTGAAGGTGATATGTGATGAGGAAACAGCAATTTCATGGGAAGATTTGAATCCTAAGATTAAGATAGAGATTCCTCAAGCTGATGTTAACTTAAATTGGCTTCATCCAATATAA 789 0.327 MGRSIQIDENAEFNVQLDGPLLKLKNDETCSIYWSNTEESEADILILNVHTNQYSFPEIINQMSKIKFSISSFISLKNLKKLSLYMCNMNQAFETNTTLISDTLPNLVELSIDYCKDIVELPNGVCNFTHLVNLTITNCHKFSSLPKEIGKLENLELLRLSSCTDFELLPDSIVRLSNLRLLDISKCISLQSLPKDIGNLSNLRSLYMENCSRCELPYSVINFENLKVICDEETAISWEDLNPKIKIEIPQADVNLNWLHPI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1417 262 Pfam Leucine Rich Repeat 178 200 IPR001611 GO:0005515
Lal16g1417 262 Pfam Leucine Rich Repeat 202 219 IPR001611 GO:0005515
Lal16g1417 262 SUPERFAMILY RNI-like 48 229 - -
Lal16g1417 262 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 16 245 IPR039203 GO:0050832
Lal16g1417 262 Gene3D Ribonuclease Inhibitor 34 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1417 Lal-Chr16 10953670 10955407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1417 70 213 WRKY Transcription Factor Family AT4G12020 32.639 2.05e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1417 - - gmx:100793054 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1417 16 10953670 10955407 Lal16g1417 16 10953670 10955407 ECH