Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1413 ATGGCTGATACAACACAACTTGTTTCACTTCCACCACTGTTTCAAGAGACATTGAAGAAGATCTTAGAAATTTTACACAAAGCTCGCAAGAACAAGAGAACCAGACGAGTCCTCAGGTCAACGCTCAGAGATTTGAACCCACTTCTCCAAGAGATCAACAAATATAATGAGAATTTGGACCCACCAAGGGAAGAAATAAAGACTCTCATCAAAGTGAAAGATGCAAGAGAAAAAGGTTTTAGTAAGTTTTGGAGTAGAATTTGGTGTAAGGAGGAAGATTCTACTGTGTTGGGGTCCACAAATCATGATGATAATAATGATGATGATGATAAGGAAGCTCTTGTTATGGCAAAAGATGTGAAGGAAACTCTTATTAAGGTGAGAGAGATTCTTAAGGTTCTTAGTGGAAAGAATTTTGATGAAATGTTTATTGGGGGACCCACTAAGGGTCCTTGTAGTGTTCCTGAGAATCAAGAATTTAGTGTTGGGTTGGATGAGATGTTGGTGAAGTTGAAGATGGAAGTGATGAAGGATGGTGGTGTGTCCATTATAGGGTTGACTGGTTTGGGAGGGTCAGGTAAGACAACTTTGGCTACTAAGCTTTGCTGGGATAAACAAGTCAAGGCGATTGCGATAACGGTTGCGGCTATTGCAATTGCGGTTATTGCGGCCATTGTGATGCAGATTGCGGCCGTTGGTTGTGGCGGTCACCGCAATCGCAATATTGCGGCCGCATCAGATGATGCGTTGGAGATCATTGTAGAGAGACTATTTGAACATTGTGGATATCAAGTGCCTGAGTTTCAAAGCAACGAAGATGCAATTAACGAATTGGGATTTTTGCTGAGGATAATTGGGGAAAGTCCAATATTGTTGGTCCTTGATGATGTTTGGCCTGGCTCAGAACCTCTTATTGAGAAATTTAAATTTCAGTTGTCAGATTATAAGATTTTGGTGACTTCAAGGGTTGCATTTCCTAAACTCGGCACCCCATACATCTTAAAACCACTTCGTCATGAAGAGGCAATGGCCCTTTTCCATCACATTGCTCTCTTCGAAGGAAGCAAATCAATTTTCCCTGATGAAGATCTTGTCCGAAAGATTGTGAGAGGTTGCAAGGGTTCACCGCTTGCCATTAAAGTGATTGGTAGATCACTCAGTCACCAGCCTTATAAGTTTTGGCAAAAAATGGTGGAAGAATTGTCACAGGGTCATTCTATAGTTGACTCTAATAAAGAATTACTTACTTGCATCGAAAAGATCTTCGATGTTGTGGAAGATAAGTCTGTCACGAAGGAGTGTTTCATGGACCTAGGATTATTTCCTGAAGACCAAAGAATTCCTGTTTCTGCTCTCATTGACATATGGATAGAAGGTTATGGACTAGATGATGACGGCAGAGAAGCCATGGACATCATCAACAAATTAGACTCCATGAATCTGGCTAATGTCTTGGTAGGAAGGAAAAATGCGAGCGACACAGACAATTGCTACTACAATAACCACTTTGTTGTCCAACATGATCTTCTTAGAGAACTTGCAATTTATCAAAGCACCCAGGAACCACTTAAACAGAGAAAAAGACTGATTATTGACATAAATGAAAAGAAACCAGAATGGTGGCTTGATGAGAAGCAGCAAGGCATGATTGCTCATATATTTTCAAAATATCTTAGATTTTGTCTTAAATCGAAGCCATTAAAGGTCTCGGCACGTACATTGTCAATATCAGATGATGAAACGGGTGCTTCAGATTGGTCCAACTTTCAAGCAGCCGAAACTGAAATTCTGATTTTTAATCTCCAAACTAAGGAGTATTCCTTTCCAGATTTCGTGGAGAAAATGAGTGAACTAAAAGTTCTGATAGTCACAAATTACGGTTTTTATCCTTCCGAATTGGACAATTTTAAGCTTCTCGGCTCTTTATGCAACTTGAAAAGAATCAGACTGGAGCGGATCTCTGTTCCTTCCTTGGTCAAACTGAAGAATCTTAAAAAACTATCCCTCTACATGTGTAATATGAGTCAAGCTTTTGAAAGTAACACAATCACAGTTTCAGATGCACTGCCAAATCTAGTGGAACTAAGTATCGATTATTGCAAAGATATGGTGGAATTGCCTACTGGGGTCTGTGATATTACTCCTTTAGTGAAGCTCGATATTACTAATTGCCACAAGCTTTCAGCACTGCCCAAAGAAATTGGAAACTTGGTGAATTTGGAACTCCTAAGGCTCAGTTCCTGTACTGATATGGAATGCTTGCCAGATTCTATTGGAAGTCTTTCAAAGATAACACTTCTTGACATCTCAAACTGCATAAGTCTTCCGAGTTTGCCAGAGGACATCGGTAATATGTCGAATCTAAGAAATCTCTACATGACAAACTGTGCAAGCTGTGAATTGCCTTACTCAGTCATCAACTTTGTGAATTTAAAGGTCATATGCGATGAAGAGACGGCTGCGTCATGGGAAGCTTTGAATCCCAATCTAAAGATAGAGGTTCCTCAAGTTGATGTTAACTTGAATTGGCTTCATGCAATATAG 2544 0.399 MADTTQLVSLPPLFQETLKKILEILHKARKNKRTRRVLRSTLRDLNPLLQEINKYNENLDPPREEIKTLIKVKDAREKGFSKFWSRIWCKEEDSTVLGSTNHDDNNDDDDKEALVMAKDVKETLIKVREILKVLSGKNFDEMFIGGPTKGPCSVPENQEFSVGLDEMLVKLKMEVMKDGGVSIIGLTGLGGSGKTTLATKLCWDKQVKAIAITVAAIAIAVIAAIVMQIAAVGCGGHRNRNIAAASDDALEIIVERLFEHCGYQVPEFQSNEDAINELGFLLRIIGESPILLVLDDVWPGSEPLIEKFKFQLSDYKILVTSRVAFPKLGTPYILKPLRHEEAMALFHHIALFEGSKSIFPDEDLVRKIVRGCKGSPLAIKVIGRSLSHQPYKFWQKMVEELSQGHSIVDSNKELLTCIEKIFDVVEDKSVTKECFMDLGLFPEDQRIPVSALIDIWIEGYGLDDDGREAMDIINKLDSMNLANVLVGRKNASDTDNCYYNNHFVVQHDLLRELAIYQSTQEPLKQRKRLIIDINEKKPEWWLDEKQQGMIAHIFSKYLRFCLKSKPLKVSARTLSISDDETGASDWSNFQAAETEILIFNLQTKEYSFPDFVEKMSELKVLIVTNYGFYPSELDNFKLLGSLCNLKRIRLERISVPSLVKLKNLKKLSLYMCNMSQAFESNTITVSDALPNLVELSIDYCKDMVELPTGVCDITPLVKLDITNCHKLSALPKEIGNLVNLELLRLSSCTDMECLPDSIGSLSKITLLDISNCISLPSLPEDIGNMSNLRNLYMTNCASCELPYSVINFVNLKVICDEETAASWEALNPNLKIEVPQVDVNLNWLHAI 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1413 847 PRINTS Disease resistance protein signature 183 198 - -
Lal16g1413 847 PRINTS Disease resistance protein signature 372 386 - -
Lal16g1413 847 PRINTS Disease resistance protein signature 759 775 - -
Lal16g1413 847 Pfam NB-ARC domain 167 405 IPR002182 GO:0043531
Lal16g1413 847 SUPERFAMILY RNI-like 601 813 - -
Lal16g1413 847 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 249 835 IPR039203 GO:0050832
Lal16g1413 847 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 11 209 IPR039203 GO:0050832
Lal16g1413 847 Gene3D - 336 415 IPR042197 -
Lal16g1413 847 Gene3D - 148 325 IPR027417 -
Lal16g1413 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 438 IPR027417 -
Lal16g1413 847 Gene3D - 426 514 IPR036388 -
Lal16g1413 847 Gene3D Ribonuclease Inhibitor 575 823 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1413 Lal-Chr16 10905604 10911760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1413 657 814 Receptor kinase-like Gene Family AT3G11080 29.560 4.42e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1413 - - gmx:112997603 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1413 16 10905604 10911760 Lal16g1413 16 10905604 10911760 ECH
Lal16g0205 16 1237031 1244865 Lal16g1413 16 10905604 10911760 PCT
Lal16g1413 16 10905604 10911760 Lal16g0205 16 1237031 1244865 PCT