Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1405 ATGCGTTGGTTACCCACCCTTTCCAAGAAGGGCAAGAAATCTACTCAAAATGATGTCGAGGAAGACGCGGTAACAGCCGCGCCTTCCCCGACATCAATTCGATCATTTGCTTCTATTGTGCCTCAGCCACTTCCCTTGCCTGAGTTGTCATCATCCGCCCCAGTGTCATCGTTGCTTCGCCAGCAGAGAGATTGTGATTGTCGCCTTCCCTCGCCTAAGGACTTGCCTAGCCCCACCGGTGTAGCTGGCTACCGAGGTTTAGAGGAACGTGATAACGCCGCGGTTGATGGTGCAGCCACCACTGGGTTTCGAATGAGGAGTGTTTTTGCTAGCCAAGAAACAAGAAGGAATATGGAGCAGGCTGAAAGTAGGTCATCAAGGATGGTGCACCAAGATCACGGTGGCTCTGAAAGCACTCGAGATAACTACTTGGTCAGCGTCCCGGCTAGGAGTGCTTCAAGTAGCCCTTTTGCCAGCCCACAGAAAACAGGAAATGGTGATTTTGTGCCATATTATTATGTTACTCCCAAAGGAAAACAATTCTGGTCTGCACCAGAGATGCCTACTTCTGAAGCGGGGCAGCCGCCTCCTGCGTTCTTTGATTTATTCACATTAAGCACTGAAACTTCCCCTACCCATCAAAGTCCACAGATAAGAAGTCCGCAGCGACACCTTAGAAGCTCAAGTGGACCTCCATCACCTATACATTCGATGTTATCCCTCGAGACACCAGCAGCGCGTCGTGAAAGTAGTGTTCCTGTCAGTGTTCACCCCTTACCCTTGCCTCCCGGGGCAGCCTTACCTTCACCATCTGCTGCTGCAACCTCTTTTTCCCATGCCACGGCTAAGTCAGAATCATTTCCAATGAAAAGCCAATGGCAAAAGGGGAAACTTATTGGACGTGGTACATTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTATGTGCAATGAAGGAGGTAGAATTATATCCCGACGATCCAAAATCTGCCGAGTGTATAAAGCAATTAGAGCAGGAAATTAAAGTACTTAGCCATCTGAAACATCCAAACATTGTGCAGTATTTTGGTAGTGAAATAGTTGAAGACCGGTTTTACATTTATCTGGAATATGTACATCCGGGTTCGATTAATAAATACATCCGTGACCACTGTGGAGCTATGACAGAAAGTGTCATTCGGAATTTTACTCGCCATATACTTTCGGGGTTGGCTTACTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGAGCTAACTTGCTTGTCGATTCAGCCGGAGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCATCTAACTGGATATGAAGCTGAACTATCTTTGAGGGGAAGTCCAAATTGGATGGCTCCTGAGCTTATGCAGGCTGTGATGCAAAGGGATAACAGCTCTGATCTAGCTTTTGCTATTGATATTTGGAGCTTGGGTTGTACAATCATTGAAATGTTCACCGGGAAGCCTCCATGGAGCGAGTACGAAGGAGCTGCAGCTATGTTTAAGGTTATGAGGGATAGCCCTCCTATACCTGAAACATTGTCATGTGACGGCAAAGATTTCCTGCGATGCTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACTGCTGCAATGTTACTCGAACATCGATTTTTGAAAAACTCACAGCAGCCGGATGTTTCATCCTCTACCCAGTTGTATAACGGAACAAGCTTCATGGATAAACCGCATAGTTCGAGAGCAATATCTATAAATAAATCCGACCACATGTCTATCCCGTGTGCGAAGATTGCAAAGGTTAAAGCCGCTGAGAGGCGTGGATTTCTCGTTCCTTCCTTGGATATCCTCCCTTCATATTGGGACCAATGA 1875 0.464 MRWLPTLSKKGKKSTQNDVEEDAVTAAPSPTSIRSFASIVPQPLPLPELSSSAPVSSLLRQQRDCDCRLPSPKDLPSPTGVAGYRGLEERDNAAVDGAATTGFRMRSVFASQETRRNMEQAESRSSRMVHQDHGGSESTRDNYLVSVPARSASSSPFASPQKTGNGDFVPYYYVTPKGKQFWSAPEMPTSEAGQPPPAFFDLFTLSTETSPTHQSPQIRSPQRHLRSSSGPPSPIHSMLSLETPAARRESSVPVSVHPLPLPPGAALPSPSAAATSFSHATAKSESFPMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVELYPDDPKSAECIKQLEQEIKVLSHLKHPNIVQYFGSEIVEDRFYIYLEYVHPGSINKYIRDHCGAMTESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGYEAELSLRGSPNWMAPELMQAVMQRDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDSPPIPETLSCDGKDFLRCCFKRNPAERPTAAMLLEHRFLKNSQQPDVSSSTQLYNGTSFMDKPHSSRAISINKSDHMSIPCAKIAKVKAAERRGFLVPSLDILPSYWDQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1405 624 Gene3D Transferase(Phosphotransferase) domain 1 289 592 - -
Lal16g1405 624 ProSiteProfiles Protein kinase domain profile. 293 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1405 624 MobiDBLite consensus disorder prediction 110 141 - -
Lal16g1405 624 MobiDBLite consensus disorder prediction 1 30 - -
Lal16g1405 624 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 12 601 - -
Lal16g1405 624 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 12 601 - -
Lal16g1405 624 SUPERFAMILY Protein kinase-like (PK-like) 283 584 IPR011009 -
Lal16g1405 624 MobiDBLite consensus disorder prediction 208 236 - -
Lal16g1405 624 ProSitePatterns Protein kinases ATP-binding region signature. 299 322 IPR017441 GO:0005524
Lal16g1405 624 Pfam Protein kinase domain 294 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1405 624 MobiDBLite consensus disorder prediction 208 257 - -
Lal16g1405 624 MobiDBLite consensus disorder prediction 117 137 - -
Lal16g1405 624 SMART serkin_6 293 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1405 Lal-Chr16 10794282 10800231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1405 12 582 MAP Kinase Kinase Kinase AT5G66850 56.716 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal16g1405 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1405 - - gmx:100790701 833.943