Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1386 ATGCCCAATAACCCAACAACAAACATGAACGACCAGTTATCAAAACAGACATCAATTTTCGGCCTCCGGTTATGGGTTGTTGTCGGCGTTTGTGTCGGCGCCACCATCGTCCTCCTCCTTGTCCTTATCTCTCTCTGGCTCACTTCAAAATTCTCCAAATCCAAAACTAAAACCAAACACAACACTGGTCCCACCACAATCCCTGATATCTCTAAAGAGATCCAAGAAATCACAATAGACCCTGTAACCCGACCCGACCCGTTTCATGAACCCGACCCGGTTACTGGAATCGAACGACAAGCCTTACTAACACTTCAACAACCAGAACAAAACAGCGACCACAACAACAGTAACAGTAGCGGTAACGGTAGTAACACGGCGTTGTTGGGGTTCAATAGAATTCAGTTTGAGATTGGGAAGAATCATAGAATCTCTTACCCAGAACGTGTTTTTGTGAGATCTTCTTCGCAATCTCAACATGGTGGTGGAGAAGGTAGACAATTGGATCAGGTTGCTACTGTGATTCCTGAAGTTTCGCATTTGGGTTGGGGTCATTGGTACACTCTCAGGGAGCTTGAGGATTCGACCGATGAATTCGCGGTTGAGAATGTTATCGGTGAAGGTGGATATGGAATTGTTTACCACGGTGTTTTGAAGGATAATACTCATGTTGCTATTAAAAATTTGCTCAATAATAAGGGACAAGCTGAGAGAGAGTTTAAGGTTGAAGTTGAAGCTATAGGAAGAGTTCGGCATAAGAATCTAGTGAGGTTGCTTGGCTATTGTGCTGAAGGGGCTCATAGAATGCTTGTATATGAGTACGTTGACAATGGCAATTTAGAGCAGTGGCTACATGGGGATGTTGGGGCTTCCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTAGGAACGGCCAAAGGGTTAACTTATCTTCATGAGGGGCTGGAACCAAAGGTTGTACATCGCGATATAAAGTCGGGCAACATTTTGATTGATAGGCAGTGGAATTCGAAGGTTTCAGACTTCGGTCTTGCAAAACTTCTTGATTCTGATAGCAGCTATATCACAACCCGTGTAATGGGTACATTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTGTATAGTTTTGGAATTCTCATTATGGAAGTAATTACTGGCAGGAATCCAGTTGATTATGGTCGTCCTCCAGAAGAGGTTAATTTGGTTGAGTGGCTCAAGAAGATGGTTAGTAACAGAAATGCAGAGGGAGTGTTGGATCCCAAACTCCCTGATAAACCAACTTCAAGGGCACTAAAGCGTATCCTTCTTGTAGCATTACGCTGCACAGACCCTAATGCACAAAAGCGGCCCAAAATGGGGCATGTCATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGTCGAGCCAGGAGGGATCCAGAACATTCACCGATCAATAAAGTAGGTGATGGATTGAAAGACGTAGCAACTATTTCCGGTGATGAATGTAGTATTGAAACCAGTATGCAAGTTAATGAGACAAGATGA 1569 0.4353 MPNNPTTNMNDQLSKQTSIFGLRLWVVVGVCVGATIVLLLVLISLWLTSKFSKSKTKTKHNTGPTTIPDISKEIQEITIDPVTRPDPFHEPDPVTGIERQALLTLQQPEQNSDHNNSNSSGNGSNTALLGFNRIQFEIGKNHRISYPERVFVRSSSQSQHGGGEGRQLDQVATVIPEVSHLGWGHWYTLRELEDSTDEFAVENVIGEGGYGIVYHGVLKDNTHVAIKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGASSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSGNILIDRQWNSKVSDFGLAKLLDSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYGRPPEEVNLVEWLKKMVSNRNAEGVLDPKLPDKPTSRALKRILLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDPEHSPINKVGDGLKDVATISGDECSIETSMQVNETR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1386 522 PANTHER OS01G0323000 PROTEIN 1 515 - -
Lal16g1386 522 PANTHER RECEPTOR-LIKE KINASE PLANT 1 515 - -
Lal16g1386 522 MobiDBLite consensus disorder prediction 472 495 - -
Lal16g1386 522 CDD STKc_IRAK 205 471 - -
Lal16g1386 522 Pfam Protein kinase domain 200 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1386 522 Gene3D Transferase(Phosphotransferase) domain 1 275 486 - -
Lal16g1386 522 SUPERFAMILY Protein kinase-like (PK-like) 176 471 IPR011009 -
Lal16g1386 522 Gene3D Phosphorylase Kinase; domain 1 170 274 - -
Lal16g1386 522 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524
Lal16g1386 522 MobiDBLite consensus disorder prediction 472 501 - -
Lal16g1386 522 SMART serkin_6 199 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1386 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Lal16g1386 522 ProSiteProfiles Protein kinase domain profile. 199 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1386 Lal-Chr16 10403214 10406793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1386 158 473 Trihelix Transcription Factor Family AT1G70460 45.483 2.46e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal16g1386 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1386 - - lang:109350106 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1386 16 10403214 10406793 Lal16g1386 16 10403214 10406793 ECH