Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1381 ATGGCGTCGCCAACCTCTACAGGTGGATCAGAGTCTCCTCTTGAGGGCCCCTCAACAAAGATAGCGCAGACCACAATTCCTACACTTGAAGATGTATTATTCGTTATTGATTCTTTAAAAAAGCAAGTTGCTGCCGATCGGTTGACTTCCATAAAGAAAAGAGTGGAAGAAAATCGACAAAAGTTGGTTGGTCTCACAGACCATCTTTTTAAAAAATCAAAGGAAATAAGAAGCACATGTAGCTTTAGTAATACGCATAGAAGTCTGGACTTACTGACAAAGAGGCAAAATGATGCAATTGATGCGCACAATGGCTTTCATAGAAGTAATGGAGGTAAGGAGAGCAGTGGTTATCATGAAGATAGCCTTGGTTGTAAAGCAATTCTTGTAAGTTATGATGCTCCTGACCCGAATTCTATTGTGACTATTATGTTACCTCAAATTGAGAGAATACCTACTTACACTACATGGCTTTTTCTGGACAGAAATGAACTAATGACAGAGAGTGTGGAAGGTCGAAGGCAAATATATTATGATCGCAATTGTGGAGAAACCCTTATTTGCAGTGATAGTGAGGAGGATATGCCAAATGAAGAAGAGGAAAAAAGAGACTTCAATAAATCAGAAGATTTTATACTATGCATGACTATCAAAGAACTTGGTTTATCTGATATTGTTCTGGAGTCACTGGGTCAATGTTTTTCTAGAGACGCCACTGGAGTCAAGGAAAGGTATGAGACTCTTAGTAGTAAAGACAACGCAGCTGGTGGTTCTAAGACAAGAGATATTGAAGGGAATTTCCAAAGTGAAAATTTATTTTTGGAAAAAGATTTGGGAGAAGTTCTTGTCACTTTTGACAACCTATTTTGCCGACGATGTCATGATTTCGTTTGTAGATTACATGGATGTTCGCAGGATCTTGTATTCCCTGCTGATAAGCAAACTCCGTGGAGTCCTCCAGATAGCACAAATGCACCATGTGGGCCAAACTGTTTTCGATTGGTACTTAAGTCAGAAATATTTGCCAGAGCGACTTCTTCTACCCAAGCTGATGTCATAGAGAATCGCTCTGGTGATGTTGGGGAGCAAACGTTGTCTAAAAAGTTTAGTGGTGTATCTCCTAAAAGGCAGAAAAAATGGAGCAAAAGTGAAAGTGCTTCATCTAATGCAAAGAACATATATGAGAGTAGTGGCTCAGGAAATGGTCCTATACAAGACAATGCTTCATCTTCCCACTCCATATCACCTAAAATTAGACCTATGAAGAAAGGTGGAATTGGTAAGACAAACAGTAAGCGTATGGTGGAATCTGTTCTTGTTTCCATGCAGAAGCAGCAAAAAAAAGCGGTGACATCTAATTCTAATTCCACCGGTGAAGGTCTTGATCGTTCAACAAGCAAGATGGATAAGAACTCTCCCATCGTTAGCAGTGTGGACATGAGGAAAGAGTTTGTACTTGAGAACGATTGTCAACTGGAATTAACTGATGATGAATCTTGGAAACCTCTTGAAAAAGGGCTTCTAGATAAAGGAATGCAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATCTGTTAAATGGTCTAAAGACATGTTGGGAGGTTTACCAATACATAGATTACAAAGAGGGGAAGATGTCAGTTCCTAATGGTGATGCTCCAAGTTCTCCTTTGGAAGTCTATTTAAAGGGCAATAAAAAAGTAAAGCGGAGATCAAAATTTTTACGTAGAAGAGGAAGAGTTGGTCGCTTAAGATATACCTGGAAATCTACTGCTTATCGTACAAATAGGAAAAGGATTACAGAGAGAAAAGATCAACTCTACAAGCAGTATAATCCATGTAGTTGCCAATCAGCTTGTGTAAAGCAGTGTCCTTGTCGTGAAAATGGAACCTATTGTGAGAAGTATTGTGGATGTCCTGATAGTTGCAAGTTTCGATTTCGTGGATGTCGTTGTGCTAAGAGTCAGTGCCAAAGTCGACAATGCCCTTGCTTTGCTGCACAAAGGGAATGTGATCCCGATGTTTGTAGGAATTGTTGGGTTGGTTGTGGTGATGGTACTCTTGGAATTCCTGGCCAAAGAGGTGATAATGAGTGTCGAAATATGCAGTTTCTTCTCAGACAGCAGCGAAGGTCTTACACACAACTAGGTTATGGATTGTTGTTTCCATCAGTGCCTAGTCCTTGGACGCCTGTGGTTCCCACCATGCCTTGGGTCTACGGTAGTGGTTGCCACTATGCACAGGCTGTGGACCACTCTGTAATTGTGCATCTCAAAGAGCTCATGATTCTTCTTGCAAAGTCTGATGTACATGGTTGGGGAGCCTTCTTAAAGGATACAGTTGAGAAGAATGAATTCCTTGGAGAGTATACTGGAGAGTTAATTTCACACCGGGAAGCAGATAAGAGAGGAAAGATATATGACCGTGAAAATTCGACATTTCTCTTTAATTTGAATGATCAGTTTGTTGTCGATGCTCACCGGAAGGGTAACAAATTAAAGTTTGCTAATCATTCTCCTCATCCAAATTGCCATGCAAAGGTTGTTATGGTTGCTGGAGACCATAGGGTAGGCATTTTTGCTACGGATCGGATTGGCGCCGGGGAGGAAATATTTTATAATTATCGATTTGCACCGGAGTGCACTCCAGACTGGGTTCGAAAGCTTGAGGCATCTGGATCAAAAAAAGAGAATGGTGCTTCTTCAAGTGGTCGTGCAGGTCGTGCGAAGAAAAGTGCTTAA 2745 0.4084 MASPTSTGGSESPLEGPSTKIAQTTIPTLEDVLFVIDSLKKQVAADRLTSIKKRVEENRQKLVGLTDHLFKKSKEIRSTCSFSNTHRSLDLLTKRQNDAIDAHNGFHRSNGGKESSGYHEDSLGCKAILVSYDAPDPNSIVTIMLPQIERIPTYTTWLFLDRNELMTESVEGRRQIYYDRNCGETLICSDSEEDMPNEEEEKRDFNKSEDFILCMTIKELGLSDIVLESLGQCFSRDATGVKERYETLSSKDNAAGGSKTRDIEGNFQSENLFLEKDLGEVLVTFDNLFCRRCHDFVCRLHGCSQDLVFPADKQTPWSPPDSTNAPCGPNCFRLVLKSEIFARATSSTQADVIENRSGDVGEQTLSKKFSGVSPKRQKKWSKSESASSNAKNIYESSGSGNGPIQDNASSSHSISPKIRPMKKGGIGKTNSKRMVESVLVSMQKQQKKAVTSNSNSTGEGLDRSTSKMDKNSPIVSSVDMRKEFVLENDCQLELTDDESWKPLEKGLLDKGMQIFGRNSCLIARNLLNGLKTCWEVYQYIDYKEGKMSVPNGDAPSSPLEVYLKGNKKVKRRSKFLRRRGRVGRLRYTWKSTAYRTNRKRITERKDQLYKQYNPCSCQSACVKQCPCRENGTYCEKYCGCPDSCKFRFRGCRCAKSQCQSRQCPCFAAQRECDPDVCRNCWVGCGDGTLGIPGQRGDNECRNMQFLLRQQRRSYTQLGYGLLFPSVPSPWTPVVPTMPWVYGSGCHYAQAVDHSVIVHLKELMILLAKSDVHGWGAFLKDTVEKNEFLGEYTGELISHREADKRGKIYDRENSTFLFNLNDQFVVDAHRKGNKLKFANHSPHPNCHAKVVMVAGDHRVGIFATDRIGAGEEIFYNYRFAPECTPDWVRKLEASGSKKENGASSSGRAGRAKKSA 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1381 914 CDD SET_EZH 764 878 - -
Lal16g1381 914 SMART CXC_2 646 683 IPR033467 -
Lal16g1381 914 Pfam SET domain 773 876 IPR001214 GO:0005515
Lal16g1381 914 SMART set_7 762 883 IPR001214 GO:0005515
Lal16g1381 914 MobiDBLite consensus disorder prediction 434 472 - -
Lal16g1381 914 MobiDBLite consensus disorder prediction 364 472 - -
Lal16g1381 914 Gene3D SET domain 735 879 IPR046341 -
Lal16g1381 914 Gene3D SET domain 612 721 IPR046341 -
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 28 459 - -
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 477 713 - -
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 762 908 - -
Lal16g1381 914 ProSiteProfiles SET domain profile. 762 877 IPR001214 GO:0005515
Lal16g1381 914 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 912 IPR025778 GO:0031519
Lal16g1381 914 MobiDBLite consensus disorder prediction 892 914 - -
Lal16g1381 914 SUPERFAMILY SET domain 614 878 IPR046341 -
Lal16g1381 914 ProSiteProfiles CXC domain profile. 598 697 IPR026489 -
Lal16g1381 914 Pfam CXC domain 650 681 IPR041355 -
Lal16g1381 914 MobiDBLite consensus disorder prediction 1 22 - -
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 459 IPR045318 GO:0006338|GO:0018024
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 477 713 IPR045318 GO:0006338|GO:0018024
Lal16g1381 914 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 762 908 IPR045318 GO:0006338|GO:0018024
Lal16g1381 914 MobiDBLite consensus disorder prediction 383 416 - -
Lal16g1381 914 MobiDBLite consensus disorder prediction 896 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1381 Lal-Chr16 10293126 10302693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1381 768 880 C2H2 Transcription Factor Family AT2G23740 30.000 1.31e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal16g1381 SET 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1381 - K11430 gmx:100799832 1085.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1381 16 10293126 10302693 Lal16g1381 16 10293126 10302693 ECH