Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1379 ATGGAAGCCACAAGGGTCATATCCACCACTACAATGAAAGCACCTAGTCACAACAACAATACTAAAACAACACATAAGATCCATTTAAACCCATGGGATCTCAATTTCCTCACACTTGAAACCATCCAAAAGGGACTTCTCTTTCACAACCCCCACAATATTGAAGAACAACAAGACATATCAATCCAAATCCAACACCTCAAAAACACACTATCTTCCACTCTTTCTTTCTTTCCACTTCTTTCTGGTCGTTTAGACATTATTCTCAATGAACATGAAGATAATAAAAATGCTACATCTTACATCCTTTGCAACAACTCAGATGGCAAGTCGTTTTGGCATTTCATCAATTCATGGGCTGAAATTTCACGTGGTAATCATAAAATATCAAAACTCCCATCATTTCAGCGTTTCTTTTTTGATACTATTGACCAACCCATTAGGTTTACTTTCACAAAACATGATGAAAGTTATTCCAAAAACTCGAGTCCATTACCAGAGAGGGTCTTCCATTTCTCAAAGGAGGAAATTCTGAAACTCAAAGCAAATGAGGAAGCTAACACTGATAAAATATCTTCCCTCCAAGCACTTCTATCTCACGTTTGGAAATCTGTGACAAGATGCAAGCATGTTGATCCATAA 642 0.3707 MEATRVISTTTMKAPSHNNNTKTTHKIHLNPWDLNFLTLETIQKGLLFHNPHNIEEQQDISIQIQHLKNTLSSTLSFFPLLSGRLDIILNEHEDNKNATSYILCNNSDGKSFWHFINSWAEISRGNHKISKLPSFQRFFFDTIDQPIRFTFTKHDESYSKNSSPLPERVFHFSKEEILKLKANEEANTDKISSLQALLSHVWKSVTRCKHVDP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1379 213 MobiDBLite consensus disorder prediction 1 24 - -
Lal16g1379 213 Gene3D - 108 153 IPR023213 -
Lal16g1379 213 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 108 213 - -
Lal16g1379 213 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 106 - -
Lal16g1379 213 Pfam Transferase family 108 210 - -
Lal16g1379 213 Pfam Transferase family 22 87 - -
Lal16g1379 213 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 108 213 - -
Lal16g1379 213 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 106 - -
Lal16g1379 213 Gene3D - 154 213 IPR023213 -
Lal16g1379 213 Gene3D - 4 107 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1379 Lal-Chr16 10256258 10257105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1379 107 211 Monolignol Biosynthesis Gene Families AT5G48930 30.833 4.55e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1379 - - gmx:100797643 145.591