Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1367 ATGACCCTCCCAAACACTATCCTTCACCTTCTTCTTCTTCCTTTTCTTCTTACCTTTCACCAATGTTATGCCCTAACTAAGGACGGTGTCCTATTACTTTCTCTCAAATACGCCGTTTTAAGCGACCCAAACTACGTTCTATCAAATTGGAACTACAATGACACCATACCCTGTTCCTGGAACGGCGTCGTATGCTCCACAATTTTAACGTCAACAAACACAACACCTCGTGTAACTTCATTATCTCTTCCAAATTCTCACCTTATAGGTTCAATTCCCTCTGATCTAGGTTTAATTGAAAATCTTCAAGTTCTAGACCTTTCTAATAACTCACTCAATGGTTCTCTACCTTCTTCATTTTTTCAACCTTCTTCACAACTTAGGTCACTTAACTTGTCTAGTAACTTAATAACTGGAGAAATTCCTGATTCGATAACTCAGCTTAGGTTTCTTGAATTTCTTAACCTTTCAGAAAATTCCTTAGTGGGAAAAGTGCCAGAGAATTTGTCGAATTTGCAAAACCTAACTGTTGTTAGTTTGAGAAATAATTACCTTTCGGGTTTTCTACCTAGCGAGCTTCGAAAGTTGCAAGTGTTGGATCTCTCTTTTAACTTGTTGAATGGAACCCTTCCGTTGAATTTCGGTGGTGATAGTATTAGTTACTTAAACATTTCTTATAACCGTTTTTCCGGTAACATATCGCCGGAGTTTGCTGCGAGGGTTCCGGTGAATGCTACCGTTGATTTCTCGTTCAACAATCTCACCGGTGAGATCCCACGTGAGATTGTTTTTTTGAACCAGGAAGAGGGTAGTTTTGGTGGGAACGTTGGTTTATGTGGTGAACCAACGAAGAAACCATGTCCTATTCCTTCTTCTCCTACTTCTTCTCCTGCAATCGCTGCGATTCCAAAGACTTTCGATGATGATGATTTGGTGTCACCAAACGGATCTTACGAACAGAAACAACAGAACGGTGGTCTTAGGAGCGGAACTGTTATAGGAATTGTAGTTGGAGACGTTGCAGGAATTGGAATCTTAGCAATGATTTTTGTGTACTTATATAAGAGAAAGAAAGAAGAGAATGCAATAAGGAATGAAGTTGAAGTTGAAGTTGAAGTTGAACATTTAGGGAGTGTTAAGAGTACTTCATCAACAACATCGGAAACAAGAGGGTTTACAAGGTGGTCATGTTTGCGAAAAAGAACAGAAGAAGAGTCATCATCAGATGCAACAGTTTCATCTGATAGTGATGTAGAAGATGCAAAAGATGTGCAGAATTACCAAAAGGGACATGAAGATCAGAAACAACTACAAAACAAAACGGGTACTTTGGTAACTGTGGATGGTGAAAAAGAGCTAGAGGTTGAAACACTTTTAAAAGCTTCAGCGTATATATTAGGTGCAACTGGTTCAAGTATAATGTATAAGGCGGTGCTTGAAGATGGAACTTCTTTAGCGGTTCGAAGAATTGGTGAGAGTGGTGTGGAACGGTTCAAGGATTTTGAGAATCAAGTAAAGGTTGTAGCTAAATTGGTTCACCCAAATTTAGTTCGAATTCGTGGGTTCTATTGGGGACATGATGAGAAGCTTATCATCTATGATTTTGTTCCAAATGGTTGTCTTGCTAATGTTCGTTACAGGAAGGTGGGGTCCTCCCCTAGTCATTTACCATGGGAGGCTCGGCTAAAGATAGCGAAAGGGGTGGCACGTGGACTTGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCAAGCAATATTCTATTATGCAACGACATGGAGCCTAAGATTGGAGACTTCGGCCTTGAAAAGATTGTGACTGGAGACACTAGTTATAAAGCTGGATCAGCACGCATATTTGGGAGTAAGAGATCCACGGCTTCACGTGATAGCTTCCAAGAAATGACTTTTGGGCCTAGCCCAAGCCCAAGCCCAAGCTCCATAGGTGGCGTTTCACCTTATAATGCACCTGAGTCCCTCAGGAGCCTGAAGCCTCACCCAAAGTGGGATGTGTACTCTTTTGGGGTCATCTTTCTTGAGTTGCTAACGGGTAAGGTTGTGGTTTTGGATGACATGGGCCAAGGGCCCGGGCTTTTGGTTGAAGATAAGAGTCGGGCTTTGCGGATGGCTGACGTGGCAATTCGGTGTGAGATGGAGGGTAAGGAGGAGGGCCTTTTGGCATGCTTCAAGTTAGGGTATAGTTGTGTGTCTAATGTTCCACAGAAAAGGCCTCCAATGAAAGAGGTGTTGCAAGTTCTTGATAAGATACCCTTGTCTTCTTATTCATTGTCATGCTATTATTAA 2313 0.4181 MTLPNTILHLLLLPFLLTFHQCYALTKDGVLLLSLKYAVLSDPNYVLSNWNYNDTIPCSWNGVVCSTILTSTNTTPRVTSLSLPNSHLIGSIPSDLGLIENLQVLDLSNNSLNGSLPSSFFQPSSQLRSLNLSSNLITGEIPDSITQLRFLEFLNLSENSLVGKVPENLSNLQNLTVVSLRNNYLSGFLPSELRKLQVLDLSFNLLNGTLPLNFGGDSISYLNISYNRFSGNISPEFAARVPVNATVDFSFNNLTGEIPREIVFLNQEEGSFGGNVGLCGEPTKKPCPIPSSPTSSPAIAAIPKTFDDDDLVSPNGSYEQKQQNGGLRSGTVIGIVVGDVAGIGILAMIFVYLYKRKKEENAIRNEVEVEVEVEHLGSVKSTSSTTSETRGFTRWSCLRKRTEEESSSDATVSSDSDVEDAKDVQNYQKGHEDQKQLQNKTGTLVTVDGEKELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVKVVAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEARLKIAKGVARGLAYLHEKKHVHGNLKPSNILLCNDMEPKIGDFGLEKIVTGDTSYKAGSARIFGSKRSTASRDSFQEMTFGPSPSPSPSSIGGVSPYNAPESLRSLKPHPKWDVYSFGVIFLELLTGKVVVLDDMGQGPGLLVEDKSRALRMADVAIRCEMEGKEEGLLACFKLGYSCVSNVPQKRPPMKEVLQVLDKIPLSSYSLSCYY 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1367 770 CDD STKc_IRAK 466 759 - -
Lal16g1367 770 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
Lal16g1367 770 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Lal16g1367 770 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
Lal16g1367 770 Gene3D Phosphorylase Kinase; domain 1 421 535 - -
Lal16g1367 770 SUPERFAMILY Protein kinase-like (PK-like) 465 760 IPR011009 -
Lal16g1367 770 SUPERFAMILY L domain-like 32 282 - -
Lal16g1367 770 Gene3D Transferase(Phosphotransferase) domain 1 537 765 - -
Lal16g1367 770 PRINTS Leucine-rich repeat signature 102 115 - -
Lal16g1367 770 PRINTS Leucine-rich repeat signature 193 206 - -
Lal16g1367 770 MobiDBLite consensus disorder prediction 628 654 - -
Lal16g1367 770 ProSiteProfiles Protein kinase domain profile. 460 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1367 770 SMART LRR_typ_2 193 216 IPR003591 -
Lal16g1367 770 SMART LRR_typ_2 148 172 IPR003591 -
Lal16g1367 770 SMART LRR_typ_2 99 123 IPR003591 -
Lal16g1367 770 PANTHER BNAC07G16060D PROTEIN 16 760 - -
Lal16g1367 770 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 760 - -
Lal16g1367 770 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Lal16g1367 770 Pfam Protein kinase domain 466 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1367 770 Gene3D Ribonuclease Inhibitor 24 193 IPR032675 -
Lal16g1367 770 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1367 Lal-Chr16 10059648 10063366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1367 15 759 Receptor kinase-like Gene Family AT4G37250 58.585 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal16g1367 Pkinase 2.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1367 - - gmx:100776204 1008.05