Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1365 ATGGCTCTCACAGAACAATCCCAAAATTCACACCAAAACTCTCTTTCAATCATTGACACCCTTCTCTGTGAAGAACAACACACCTTTGAAGAGGAAGAAGAAGATTTTGAGACAAAAAATGATGATGGGTCTTCATTATCAGTGAGAAAGTTTCAACCTTTGCCTTTGGTTTTGTTGGAGAATGATTTGTTCTTGGAACATGAGGAGCTTGTGTCGTTAATTTCCAAAGAGAGAGAGACCCATTTGAACCATTTGATTTTTGATGGATCCTTACAGGAACACCGTGTTGATGCTGTTAGCTGGATTTCTAAAGTTTGTGCGCATTTTGGGTTTTCTTCTTTGACCATTGTTCTTGCTGTGAACTACTTTGATAGGTTCATCACAAACCTCAAGTTTCAGGATGATAAGCCATGGATGACACAGCTCATTGCTGTTACTTGTTTGTCCCTTGCTGCCAAAATGGAAGAGACCCATGTGCCACTCATTTTGGACCTTCAAGTGGAGGAATCAAGATTTTTGAATGAAGCAAAGCCTATACAGGCTGTGTTTTTGTACTTGCATTGGTTTTTAAATGTGGAGGAATCAAGGTTTGTGTTTGAAGCGAAGACTATACAGAGAATGGAGCTGATAGTGTTGTCAACTCTTAAATGGAGGATGAGCCCGGTAACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGACTTGGTTTAAAGAGCCGTTTGCATTGGGAGTTTCTGTGGCATTGTGAGCGAGTTCTTCTTAATGTTATTGCGGATTTCAGGGTTATGAGTTATCTTCCTTCTACACTCGCTGCTGCTACAATGATCCATGTTATTAAAGAGATTGAACCATTTAATGTAACAGAGTACATTGATCAACTTCTGGGTTTACTCAAGGTTACTGAGGAACAAGTGAACCAGTGCCATAAACTCATATTGGAACTATTAGTTTGCAATGAAGGAATTCACAACCTTCACCAGAAACGCAAGCGCATGTTTGAACCAAGTAGCCCAGGTGGTGTCATTGATGCATCTTTCAGTTGTGATAGCTCAAATGATTCATGGACCAATGCATCATCAGTCTTGCCTTCACTGGAGCCACTGTTCAAGAGGAGCAGAACTCAAGAACAGCAGATGCGGTTACCTTCTGTTAATCGTGTCTCTGTCGATGTTCTCAATAGCCCTCGTTAA 1191 0.4064 MALTEQSQNSHQNSLSIIDTLLCEEQHTFEEEEEDFETKNDDGSSLSVRKFQPLPLVLLENDLFLEHEELVSLISKERETHLNHLIFDGSLQEHRVDAVSWISKVCAHFGFSSLTIVLAVNYFDRFITNLKFQDDKPWMTQLIAVTCLSLAAKMEETHVPLILDLQVEESRFLNEAKPIQAVFLYLHWFLNVEESRFVFEAKTIQRMELIVLSTLKWRMSPVTPISFFEHIVRRLGLKSRLHWEFLWHCERVLLNVIADFRVMSYLPSTLAAATMIHVIKEIEPFNVTEYIDQLLGLLKVTEEQVNQCHKLILELLVCNEGIHNLHQKRKRMFEPSSPGGVIDASFSCDSSNDSWTNASSVLPSLEPLFKRSRTQEQQMRLPSVNRVSVDVLNSPR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1365 396 PANTHER CYCLINS 191 379 IPR039361 -
Lal16g1365 396 PANTHER CYCLINS 3 184 IPR039361 -
Lal16g1365 396 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Lal16g1365 396 Gene3D - 215 336 - -
Lal16g1365 396 PANTHER CYCLIN-D3-2 3 184 - -
Lal16g1365 396 PANTHER CYCLIN-D3-2 191 379 - -
Lal16g1365 396 SUPERFAMILY Cyclin-like 66 219 IPR036915 -
Lal16g1365 396 Gene3D - 89 214 - -
Lal16g1365 396 CDD CYCLIN 94 167 IPR013763 -
Lal16g1365 396 Pfam Cyclin, N-terminal domain 74 220 IPR006671 -
Lal16g1365 396 SUPERFAMILY Cyclin-like 223 322 IPR036915 -
Lal16g1365 396 Pfam Cyclin, C-terminal domain 222 321 IPR004367 -
Lal16g1365 396 SMART cyclin_7 100 213 IPR013763 -
Lal16g1365 396 SMART Cyclin_C_2 222 349 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1365 Lal-Chr16 10034640 10036928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1365 1 386 Core Cell Cycle Gene Families AT5G67260 47.859 2.26e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1365 K14505 - gmx:100785030 508.064