Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1357 ATGGAAACGACAACGTTGGAAAATTGTTCTGTCAAAGTTGCTCTTCATATTCGTCCTCTCATTTCTGATGAACGACAAAAAGGTTGTAGAGAATGTGTTTCAGTGACACAGGGAAAACCTCAGGTTCAAGTTGGGTCACATTCCTTTACATTTGATCATGTTTATGGAAATGGTGGATCTCCTTCATCTAACATTTTTGAAGAATGTGTTGCTCCATTGGTTGATGCCTTATTCCAAGGATACAATGCTACTGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACTTACACCATGGGAACTGGCTGCAGTGACAATTGTCAAACTAGATTAATCCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAAGCACTGAAGCATCAAACAGAATTTCAATTGCGTGTCTCCTTCGTTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTGGATACAGAATCTTTACGAAAAACAGAAACGTTTAATGGCCATTCTGGCAAAGTTCCTGGGAGGTCACCGATTCAAATTCGTGAAACATCAAATGGAGCAATAACATTGGCAGGATCAACCGAAGTTGCTGTAAGTACATTACAGGAGATGGCTGCTTGCTTAGAGCAGGGTTCTTTAAGTAGGGCAACCGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATTACATTAGAACAGATGCACAAACTTCATTCAATTTCTTCAAGCAATGACACTTCAGAGGAAGATATGGGTGAAGAATACATTTCTGCAAAGCTCCATCTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGCTCTGATGGTCTTCGTTTACAGGAAGGCATACACATCAATAAAGGTCTTCTTGCACTTGGTAATGTCATTAGTGCACTGGGGGATGAGAAAAAGAGAAAGGAGGGTGCACATGTTCCTTATCGGGATAGCAAACTAACTCGACTTTTACAGGATTCACTTGGTGGAAACAGCAAGACTGTAATGATAGCTTGCATTAGCCCTGCAGACATCAATGCTGAGGAGAGTCTTAATACTCTCAAGTATGCAAATCGTGCACGCAATATTCAAAATAAGCCTGTTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAATACTTGCAGGATGAACTTTGTGCTCGAGGAAGAGCTCCATCTGATGAATTACGGGTTCTCAGGCAAAGGATTGCTTGGCTTGAAGCAACTAATGAGAACCTCTGTCGAAAACTTCATGAATATCACAGCAGATGTGCTTTTGTAGGGAGAAGTGACATAGATGAACTAGTATTAACAAGGAACTCTCTGGTGGTTGGAGGCTCCCTGGTCGCGGTTTGGTCCAACAAGTGGGTATCAGAGCCGATGGTTGGACATATTTATCTTGATAAAACTGATGGGGTTGAGAGGCACGTACAGAGCTCACATTCATATGACCTTCCCATGGCTGAAAGTATATCAGGTGAGGATTCGAGGGAAACTGATGGAACAGCAAAAGTGCTGGAGCATGTACTCTTGCAAAATAGAATGGATAAAGAGATGAATGAATTAAATAAGTGCTTAGAGCAGAAAGAGTCTGAGATGAATCTTATTGGAGTGGATACTGAAGCACTCAAACAGCATTTTGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAACAGTGCAGAAAGAAAGGGACCGTTTGTTGCACGAGGTAGAAAATCTTGCTGCTAATTGTGATGGACGACAGAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTGAAGAAAAAACAAGAAAGCCAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAAAAATTTCGACAATGGAAGGCTTATCATGAGAAGGAGTTATTCCAGTTGAAAAAGGAGGGAAGAAGAAATCAGTATGAAAGGCATAAACTTGAGGCTCTAAACCAGCGGCAAAAAATGGTCCTTCAAAGAAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAATTGTTGGATGCCAGCAAACATTCGCCACATGAAAACTCTGTGTACGCAAATGGACATCTACAGCCGGGGAAGGTCAACGAGAAAGCCCTCCACAGGTGGCTTGATCAAGAGCTTGAGGTCATGGTGCATGTGCATGAAGTTCGCGCTGAATTTGATAAACAAAAGCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTTTACTGAAACAAGTGGATCAATTTTCAGATGTGCAGAGTATCTCCACACATAAGAGCAGATATTCCAGACTGTTATCCATGTCACCAGATGTAAAAGTGGCAAGAATAGCTTCTCTTGAAAACATGCTAGGCATGTCTTCAGTTGCTTTGAAATCTATGGCTTCACAACTTACTGAGGCAGAAGAAAGGGAACGTACGTTAAATAACCGTGGGCGTTGGAATCAATTACGTTCAGTGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCGACAGCAGAAACTAGATGGCAGTTGTGGGAAAAGCATATGGAACTTAAGGACTTGAAAGAACAACTAAGTGAGCTTGTAACACTACTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTGACAGAGCAAAAAACGAGCGAACAAGCTGCTATCGTCGCATTGAATACACCGACAGCATTGGAAAACTCACGGTCCTTGAAACACCTGGCCGACGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCAGCCCTGGAGTTGTTAACGGGTCAGTCAAGGAGTCACTCACATTCATGGATGATGCACAAAAGATGATACCCATCGGAGAGTTATCAACAAAAAGGCTAGTAGCTATAGGACAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTCAAATGGAAGTGGCAAAAGCCGTGGAAACTCTCAGAATGGATTAAACATAGTGATGAGACAATCATGCGGTCCAGGCCTCGAGCACAAGCATCATAA 3072 0.4225 METTTLENCSVKVALHIRPLISDERQKGCRECVSVTQGKPQVQVGSHSFTFDHVYGNGGSPSSNIFEECVAPLVDALFQGYNATVLAYGQTGSGKTYTMGTGCSDNCQTRLIPQVMNALFNKIEALKHQTEFQLRVSFVEILKEEVRDLLDTESLRKTETFNGHSGKVPGRSPIQIRETSNGAITLAGSTEVAVSTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSISSSNDTSEEDMGEEYISAKLHLVDLAGSERAKRTGSDGLRLQEGIHINKGLLALGNVISALGDEKKRKEGAHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQDELCARGRAPSDELRVLRQRIAWLEATNENLCRKLHEYHSRCAFVGRSDIDELVLTRNSLVVGGSLVAVWSNKWVSEPMVGHIYLDKTDGVERHVQSSHSYDLPMAESISGEDSRETDGTAKVLEHVLLQNRMDKEMNELNKCLEQKESEMNLIGVDTEALKQHFGKKIMELEEEKRTVQKERDRLLHEVENLAANCDGRQKTQDVRGQKLKALEAQILDLKKKQESQVQLQHKMKQEAEKFRQWKAYHEKELFQLKKEGRRNQYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLDASKHSPHENSVYANGHLQPGKVNEKALHRWLDQELEVMVHVHEVRAEFDKQKQVQAALEEELALLKQVDQFSDVQSISTHKSRYSRLLSMSPDVKVARIASLENMLGMSSVALKSMASQLTEAEERERTLNNRGRWNQLRSVGDAKNVLQYLFNATAETRWQLWEKHMELKDLKEQLSELVTLLQQSEAQRKELVTEQKTSEQAAIVALNTPTALENSRSLKHLADEMSGPLSPMSLPAPKQLKFSPGVVNGSVKESLTFMDDAQKMIPIGELSTKRLVAIGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQAS 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1357 1023 CDD KISc_KIF4 9 366 - -
Lal16g1357 1023 Pfam Kinesin motor domain 17 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 Gene3D Kinesin motor domain 2 393 IPR036961 -
Lal16g1357 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 397 IPR027417 -
Lal16g1357 1023 SMART kinesin_4 8 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 Coils Coil 804 824 - -
Lal16g1357 1023 Coils Coil 861 895 - -
Lal16g1357 1023 Coils Coil 521 541 - -
Lal16g1357 1023 Coils Coil 732 752 - -
Lal16g1357 1023 Coils Coil 672 692 - -
Lal16g1357 1023 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 619 1022 - -
Lal16g1357 1023 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 5 443 - -
Lal16g1357 1023 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 471 622 - -
Lal16g1357 1023 Coils Coil 602 622 - -
Lal16g1357 1023 Coils Coil 373 393 - -
Lal16g1357 1023 ProSiteProfiles Kinesin motor domain profile. 10 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 Coils Coil 405 425 - -
Lal16g1357 1023 PANTHER KINESIN-LIKE PROTEIN KIN-4B 5 443 - -
Lal16g1357 1023 PANTHER KINESIN-LIKE PROTEIN KIN-4B 619 1022 - -
Lal16g1357 1023 PANTHER KINESIN-LIKE PROTEIN KIN-4B 471 622 - -
Lal16g1357 1023 Coils Coil 553 587 - -
Lal16g1357 1023 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal16g1357 1023 PRINTS Kinesin heavy chain signature 80 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1357 1023 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1357 Lal-Chr16 9935942 9949036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1357 11 398 Calmodulin-binding Proteins AT5G65930 35.714 5.21e-55 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1357 - - gmx:100790341 1573.91