Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1350 ATGGCTTCTCTACTATCTCACAGAGTTCAACACTCTTTCTTCATACTTCTTTTCCTTCTCCAATTCATCTCACTTGGCTACACTAACCCAAACAAGTACTTCATCAATTGTGGCTCAGATAACAATGTTACAGAACCACAAAATGGTAGAGTTTTTGTTGGAGAATCAAACTCTCTAGCAACCTTTAGCAGCAAGAAAAGCAGAACAGAAACCATCACAAACCAATCATTACTCTATCCTCTTTACCAAACAGCAAGGATTTTCACTCATACTAATTCTTGGTATGAGTTCAACATTGACACAAATGGTACCTACATTATACGCCTCCATTTCTTAGCTTTCACTACTAATCTTTCCTCAGCCAAGTTCAATGTTTCAGTTCCAAATTTCTGTCTTTTAGAAAATTTCGATGCGCGGAATTATACCAACTCGGCTTTAGTTAAAGAGTTTATCTTTAACATCTCTAATGGAAACTTTAAAATCAGTTTCAAACCTTTGTCACATTCATTTGCCTTTGTGAATGCTATAGAGCTCTTCATACTTCCCCTCAATTTGATCCATAGTCCTTACCCGGGTAGTATGCAGTCACAGTTGTTGGAAACAATACACAGAATTAATGTTGGTGGAAACAATGTCACTAGGGACTTTGATGATTTATGGAGAAACTGGTTAGCAGATGATCCTTATCGATTAAATCGAGAAATCGCGACGAATGATGTCCCATATAACGGTCGAATCAAGTACCATGTTGGTGATGATTCTGTTGGTCCAAATTCTAATAGATTTACTGCACCAAATCCTGTGTACCAAACTGCTAAGCAGATTATAAGTAATAGCTCTGAGTTAAACATTACTTGGGGTTTTCATGTGAACAAGGATGCAGATCATTTCATTCGGTTTCATTTCTGTGACATTTATAACCACTTTCAAACTGGGATTTCATATTTCAGTTTGTACATTGATGGCATCTTTGTAAGGCTTATAAATAACAATTCGGATGGAATTGTGTTGAATCCATTGCCTGCTCCTTATTATTATGATTATCTGGTTCACTCTGATGATTCTGGTGTAGTGAAGATTAGTGTAGGACTTGATCTAACTGCACAAGTGAAGATGGCTTTTTTGAATGGGCTAGAAATAATGAAAGTGGGTAATTCATCAGATTCTGTTCACTCTTATAATCATAATCATAATCATATTGGTGTTGTGATAGGTTCAGTTCTTGGAGGTTTAGTTCTGGTTTGTGCTATAGTATTGGTATTTCTGTGGTATAATAACATTCCGAAGCAAAAGCCGGTTGCGAATTCGGATTGGTTGCCGATTCCTGTTAATGCAGGAGGGAGTTCTCATAGCAGATTCTCTGAGGGAGTTCCCAACATGTATCTTGGACTGAAGATTCCTTTGGTTGATATTCAATTAGCAACAAGTAACTTTGATGCCAAACATAAAATTGGCAAAGGAGGTTTTGGCAATGTGTATAAAGGAGTTCTCAAGAATGGGATGAGAGTGGCTGTGAAAAGAAGTGAACTAGGGTCAGGTCAAGGCCTTTCTGAGTTTCAAACCGAGATCATGGTTCTGTCGAAGATTCGCCATCGGCATCTAGTTTCTTTAATAGGTTATTGTGATGAAAAAGATGAGATGATACTAGTTTATGACTACATGGAGAAAGGTACACTTAGAGATCATTTGTACAAGACAAATTTTCCAACCTTGTTTTGGAAGCAAAGGCTTGAAATTTGCATTGGTGCTGCAAGAGGTCTTCATTACCTTCACAAAGGAGTAGCGGGTGGAATCATCCACCGTGATGTGAAGTCCACAAACATATTACTTGATGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTTTCAAAATCAGGCCATCTTGATGATCATCAATCATATGTTAGCACAGATGTTAAAGGCACTTTTGGGTATCTTGACCCTGAATATTTCAAGTCACTACAACTTACAGAAAAATCTGATGTATATTCATTTGGTGTGGTTCTTTTAGAAGTTTTATGTGCAAGACCAGCTATTGATTCTATGCTTTCAAGGGACCAAGCAAACTTGGCTGAATGGGGACTCCTTTGCAAAAACAAGGGAATACTAGAAGATATCATTGACCCTTCAATCAAGGGTCAAATCAACCCAAACTCACTCAGAAAATTTGGTGAAACATTTGAAAAGTGTTTGCATGAATATGGTTGTGATAGGCCATGCATGACTGATATATTGTGGGACTTAGAGTATGCATTGCAGCTTCAGTGTGGTGCAGTAGAGACTCATGAGGATAGTTCTAGTAGTTCTTATGCATTGCTTCAATTTCCTAATGTGAGGCTTTTTCCTTCACTTTCTATACTAAGTGAAGTGGAAGATATGTCCATTGTGAAGGGTTATGAATCTGATATAGCATCAGATTCTGTTTTCTCTCAAGTCAAAGTTGTTCATGACATATAG 2460 0.376 MASLLSHRVQHSFFILLFLLQFISLGYTNPNKYFINCGSDNNVTEPQNGRVFVGESNSLATFSSKKSRTETITNQSLLYPLYQTARIFTHTNSWYEFNIDTNGTYIIRLHFLAFTTNLSSAKFNVSVPNFCLLENFDARNYTNSALVKEFIFNISNGNFKISFKPLSHSFAFVNAIELFILPLNLIHSPYPGSMQSQLLETIHRINVGGNNVTRDFDDLWRNWLADDPYRLNREIATNDVPYNGRIKYHVGDDSVGPNSNRFTAPNPVYQTAKQIISNSSELNITWGFHVNKDADHFIRFHFCDIYNHFQTGISYFSLYIDGIFVRLINNNSDGIVLNPLPAPYYYDYLVHSDDSGVVKISVGLDLTAQVKMAFLNGLEIMKVGNSSDSVHSYNHNHNHIGVVIGSVLGGLVLVCAIVLVFLWYNNIPKQKPVANSDWLPIPVNAGGSSHSRFSEGVPNMYLGLKIPLVDIQLATSNFDAKHKIGKGGFGNVYKGVLKNGMRVAVKRSELGSGQGLSEFQTEIMVLSKIRHRHLVSLIGYCDEKDEMILVYDYMEKGTLRDHLYKTNFPTLFWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENHVAKVADFGLSKSGHLDDHQSYVSTDVKGTFGYLDPEYFKSLQLTEKSDVYSFGVVLLEVLCARPAIDSMLSRDQANLAEWGLLCKNKGILEDIIDPSIKGQINPNSLRKFGETFEKCLHEYGCDRPCMTDILWDLEYALQLQCGAVETHEDSSSSSYALLQFPNVRLFPSLSILSEVEDMSIVKGYESDIASDSVFSQVKVVHDI 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1350 819 CDD STKc_IRAK 484 750 - -
Lal16g1350 819 Gene3D - 30 180 - -
Lal16g1350 819 Gene3D - 199 383 - -
Lal16g1350 819 PANTHER OS07G0166700 PROTEIN 24 768 IPR045272 GO:0004714|GO:0006468
Lal16g1350 819 Pfam Protein tyrosine and serine/threonine kinase 480 745 IPR001245 GO:0004672|GO:0006468
Lal16g1350 819 SUPERFAMILY Protein kinase-like (PK-like) 465 747 IPR011009 -
Lal16g1350 819 SMART serkin_6 478 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1350 819 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Lal16g1350 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Lal16g1350 819 ProSiteProfiles Protein kinase domain profile. 478 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1350 819 Pfam Malectin-like domain 35 383 IPR024788 -
Lal16g1350 819 Gene3D Transferase(Phosphotransferase) domain 1 554 772 - -
Lal16g1350 819 PANTHER BNAC03G27170D PROTEIN 24 768 - -
Lal16g1350 819 Gene3D Phosphorylase Kinase; domain 1 450 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1350 Lal-Chr16 9861142 9863601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1350 15 815 Receptor kinase-like Gene Family AT2G23200 45.400 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal16g1350 Malectin_like 4.8e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1350 - - adu:107480521 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1350 16 9861142 9863601 Lal16g1350 16 9861142 9863601 ECH
Lal16g1350 16 9861142 9863601 Lal23g0181 23 1551323 1553827 LSH