Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1345 ATGACTTTCATAAAGGAGGTTGAAGTAGGTTATGAGATATCAATCAATAAACAATATATAGATGGTGGATCAAACTCATCACAGACTCATGAAGATGCTACTAGCTTTGGAGATTGGTTGAGTTTAGGCCTCAAAGGAGACATGCCTCTTGAATCAGCATCTGATCATCAAAACACAGATTCTCAATCAAAACCTAACAAAAACAACAAACTGTTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCCTAGGTGGACATCAGAATGCACACAAAAGAGAAAGAGGAGCAGCTAAGAATTATCAATCTCATAAGATGATGATGATGATGAGGACTTCACTGAAGAGGCCACTGAGAATCCAAACTCACTCACTTGTGCATAAACCAAACCAAGAAAAGTCTGCTATGGCTGCTAGATTCAGTGATGCAAATTCTGTGATTGGAATGGTATGGAAACCCTTTATGCATGTGGATTCAATTTGGCCAGGAAGCTTTAGGGTGGATATGCCAAAGCAAGAGTCAAATATTAATAAGCTTGACTTAGATCTTAGGCTTTGA 567 0.3862 MTFIKEVEVGYEISINKQYIDGGSNSSQTHEDATSFGDWLSLGLKGDMPLESASDHQNTDSQSKPNKNNKLFSCNFCMRKFYSSQALGGHQNAHKRERGAAKNYQSHKMMMMMRTSLKRPLRIQTHSLVHKPNQEKSAMAARFSDANSVIGMVWKPFMHVDSIWPGSFRVDMPKQESNINKLDLDLRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1345 188 Gene3D Classic Zinc Finger 51 148 - -
Lal16g1345 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 188 - -
Lal16g1345 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Lal16g1345 188 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Lal16g1345 188 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 188 - -
Lal16g1345 188 SUPERFAMILY beta-beta-alpha zinc fingers 68 98 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1345 Lal-Chr16 9814734 9815300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1345 58 179 C2H2 Transcription Factor Family AT1G24625 39.416 9.60e-19 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1345 16 9814734 9815300 Lal16g1345 16 9814734 9815300 ECH