Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1333 ATGGAAGCGTTTATCAAACCTTTATTTCTAGTTCTCTTCCTTCTATTACATCTCTTCTCCAATTTCTCCCTTGCTGAAAAGAAAACTTACATAGTCCACGTGGCGAAATCTGAGATGCCGGAAAGTTTCAATCACCACACACTTTGGTACGAATCGTCTCTCAACTCGGTTTCTGACTCAGCTCAACTCATCTACACCTACGATAACGCCATTCATGGCTTCGCGACGAGGTTAACACCAGAAGAAGCTTCTTCGCTTGAATCTCAAACTGGAATTCTAGCTGTTCTTCCTGAAATGAAGTACGAGCTTCACACAACAAGAACCCCTCAGTTTCTAGGTCTCGATAAAAGTGCAGATCTCTTCCCTGAGTCAAGTTCATCCAGTGACGTCATCGTCGGAGTTCTCGACACCGGTATCTGGCCTGAAAGCAAAAGCTTCGACGACACCGGAATGGGACCTATTCCGGCGACATGGAAAGGTGAATGCGAAACCGGTACAAATTTCACAACAGCAAACTGTAACCGAAAGCTAATCGGAGCAAGGTTCTTCTCAAAAGGCTATGAAGCTATGTTAGGTCCAATCGATGAATCGAAGGAGAGTAAATCTCCACGTGACGACGATGGCCACGGCACACACACCGCAACCACCGCTTCCGGTTCCGTCGTTCCCGGCGCAAGCTTGTTCGGTTTCGCACCGGGAACAGCGCGTGGGATGGCCACGCGCTCGAGAGTAGCCGCATATAAAGTGTGCTGGTTAGGTGGTTGTTTCAGTTCAGATATCTTAGCCGCTATAGAACAAGCTATCATTGATAACGTTAACGTTCTTTCTTTATCTCTTGGTGGTGGAATGTCTGATTATTACAGAGACAGTGTAGCTATTGGTTCTTTTGCTGCAATGGAGAAAGGGATTTTGATTTCTTGTTCTGCAGGAAATGCGGGACCCAGTTCTTACAGTCTTTCAAATGTGGCTCCATGGATCACTACTGTGGGCGCGGGTACACTGGATCGGGACTTCCCTGCTGAAGTTATAATCGGTAACGGAAAAAACTATTCTGGTGTGTCGCTTTATCGTGGTCACGCTTTGCCAGATACTCCGTTACCGTTTATTTACGCCGGGAATGCTAGTAATTCAAGTAGTGGGAATTTGTGTATGATGGGTACATTGACTCCGGAGAAGGTTGCCGGGAAAATTGTGTTGTGTGACCGTGGAGTGAGTGCTAGGGTTCAGAAAGGTGTTGTGGTGAAATCCGCCGGAGGTTTGGGGATGGTGTTGGCGAATACGCCGGCAAACGGTGAGGAGTTGGTGGCGGATGCGCATCTTTTGCCTGCTACGGCGGTGGGTGAGAAAGAAGGGGATGCGATTAAGAAGTATCTGTTTTCTGATCCTAATCCAACGGTTAAGATTGTGTTTCAAGGAACTAAGGTTGGGATTCAACCTTCACCGGTTGTTGCAGCTTTTAGTTCAAGGGGTCCAAATTCAATCACACCGCAGATCTTGAAGCCAGATCTGATTGCGCCAGGTGTCAACATCTTAGCTGGGTGGTCAAAGAACGTGGGTCCTACTGGTTTGGCAAGTGATAATAGGCGCGTGGATTTCAACATCATTTCTGGTACGTCAATGTCGTGTCCTCACGTGAGCGGTTTAGCCGCTCTGATTAAATCGGCTCACCCGGATTGGAGCCCAGCCGCGGTTCGATCGGCCCTGATGACAACGGCTTATACGGCTTACAAGAATGGTTTGAGCTTAAAAGACAGTGCTACTGGAAAACAATCAACACCGTTCGATCACGGTGCAGGACACGTGGACCCTATCTCCGCTGTCAATCCTGGACTCGTCTACGATCTAACGGTGGACGATTATCTAAGCTTCCTTTGCGCGTTGAACTACTCCGCGGTTCAAATAACAACACTTGCTAGGAGAAAGTTCCAATGCGAGCCGAGTAAGAAATACAATGTAAATGACCTAAACTACCCTTCGTTTGCTGTGTTATTTCAAACAACGGGTGGGGCCAACATTGTGAAACACACGCGAGTTCTCACTAACGTGGGGCCCGCGAGTGTTTACAATTCATCAGTGACATCAGATAGCTCGTTAGTGAAGATCTCGGTTGAACCGCAAGTGTTGAGTTTCAGGGAGAATGAGAAAAAATCATATACGGTGACGTTCACGTCAACATCTGGTGCAACCACTCAGAGTGTGAATAGTTTTGCGCGATTGGAATGGTTAGATGGGAAGAACGTGGTTGGAAGCCCAATATCTATAAGCTGGGATTGA 2274 0.4741 MEAFIKPLFLVLFLLLHLFSNFSLAEKKTYIVHVAKSEMPESFNHHTLWYESSLNSVSDSAQLIYTYDNAIHGFATRLTPEEASSLESQTGILAVLPEMKYELHTTRTPQFLGLDKSADLFPESSSSSDVIVGVLDTGIWPESKSFDDTGMGPIPATWKGECETGTNFTTANCNRKLIGARFFSKGYEAMLGPIDESKESKSPRDDDGHGTHTATTASGSVVPGASLFGFAPGTARGMATRSRVAAYKVCWLGGCFSSDILAAIEQAIIDNVNVLSLSLGGGMSDYYRDSVAIGSFAAMEKGILISCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAEVIIGNGKNYSGVSLYRGHALPDTPLPFIYAGNASNSSSGNLCMMGTLTPEKVAGKIVLCDRGVSARVQKGVVVKSAGGLGMVLANTPANGEELVADAHLLPATAVGEKEGDAIKKYLFSDPNPTVKIVFQGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKNVGPTGLASDNRRVDFNIISGTSMSCPHVSGLAALIKSAHPDWSPAAVRSALMTTAYTAYKNGLSLKDSATGKQSTPFDHGAGHVDPISAVNPGLVYDLTVDDYLSFLCALNYSAVQITTLARRKFQCEPSKKYNVNDLNYPSFAVLFQTTGGANIVKHTRVLTNVGPASVYNSSVTSDSSLVKISVEPQVLSFRENEKKSYTVTFTSTSGATTQSVNSFARLEWLDGKNVVGSPISISWD 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1333 757 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Lal16g1333 757 CDD Peptidases_S8_3 101 573 IPR034197 -
Lal16g1333 757 Pfam PA domain 381 454 IPR003137 -
Lal16g1333 757 SUPERFAMILY Subtilisin-like 103 611 IPR036852 GO:0004252|GO:0006508
Lal16g1333 757 CDD PA_subtilisin_like 342 468 - -
Lal16g1333 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 104 IPR037045 -
Lal16g1333 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Lal16g1333 757 Gene3D Peptidase S8/S53 domain 129 620 IPR036852 GO:0004252|GO:0006508
Lal16g1333 757 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 19 755 - -
Lal16g1333 757 Pfam Subtilase family 127 580 IPR000209 GO:0006508|GO:0008236
Lal16g1333 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 755 IPR045051 -
Lal16g1333 757 MobiDBLite consensus disorder prediction 195 211 - -
Lal16g1333 757 Pfam Fibronectin type-III domain 654 754 IPR041469 -
Lal16g1333 757 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Lal16g1333 757 MobiDBLite consensus disorder prediction 195 218 - -
Lal16g1333 757 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Lal16g1333 757 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Lal16g1333 757 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Lal16g1333 757 Gene3D - 624 756 - -
Lal16g1333 757 Gene3D - 335 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1333 Lal-Chr16 9634929 9637202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1333 9 756 Subtilisin-like Serine Gene Family AT5G67360 72.000 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1333 - - gmx:100815413 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1333 16 9634929 9637202 Lal16g1333 16 9634929 9637202 ECH
Lal15g0186 15 1287171 1289527 Lal16g1333 16 9634929 9637202 PCT
Lal16g1333 16 9634929 9637202 Lal15g0186 15 1287171 1289527 PCT