Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1329 ATGATGCAATTCACACCTCCAATACCACCTTTCCACCAAAATATCATACCCTTATTTTCAAACCCTACCATGAACCAAAACCAAGTACCTAGCCCTAAACCTAGTCCATGCCCTACAGGGTTAATCCCCACAACCAAGGCCCTAAGTAGTAGCTTTGGAGATACAAACTGCATGGAACAATTACTTGTTCATTGCGCAAACGCTATAGAAACAAACGATGTAACATTAGCACAACAAATTCTCTGGGTCCTCAACAACATAGCCCTCCCCGATGGTGACACGAATCAACGGTTAGCCTATAGCTTCCTTCGGGCCCTCACGGTTCGCGCCGCGAAGACCGGGAGTTGCAAGATGGTGGAGGCGATGATGGGGGAAGAATCTCGTAGCCACCTTGCAATTGGCACACACAAATTCAATGTCATTGAATTAGCCAACTTTGTTGACCTAACACCATGGCATCGATTTGGCTTCACTGCCGCTAACACGGCCATTCTAGAAGCTTGTGAAGGGTTCTCGGTGATTCATATTGTGGACTTAAGCTTGACGCATTGCATGCAAATACCTACGCTTATCGATGCTATTTCTAGCCGCCACGAAGTTCCACCTTTGATCAAGTTAACCGTAGCAGGTGATAACTGCAGAGACATTCCACCGGTTCTGGATCTTTCTTATGATGAATTAGGTGCCAAGTTGGTTAATTTCGCTAGGTCTAGGAACGTGATCATGGAATTCAGGGTGGTTCATTCAAATTACACAGATGGGTTTACTTCTTTGATGGAACATTTAAAGGTGCAACACTTAGTTTATACTTCAGAAGCTGGTGCAAGTGAAGCATTGGTTATAAATTGTCACATGATGCTTCACTATATCCCTGATGAAACCCTTACTCATGATATGGACACAAACTCTTATGTTTATGATTATGGTTATCATTCTTCTACTTTGTCATTGAGGTCATTGTTCCTTAAAGAATTGAGGAGTTTAGACCCAACTATTGTTGTTTTGGTTGATGAAGATGCTGATTTAACATCTAGGAACTTGGTTTGTAGACTAAGGTCTGCGTTTAATTATCTATGGATACCTTATGACACTATGGACACGTTTCTACCAAGAGGGAGCAAACAAAGGCAGTGGTATGAATCAGATATTTGCTGGAAGATTGAGAATATTATAGCACATGAAGGGCTTCAGAGAGTTGAAAGAGTTGAACCAAAAAGCATGTGGGAACAAAGAATGAGGACTGCAAACTTTCATGGTGTTCCAATCAGTGAGGATTCAGTTTCTGAGGTGAAGGCAATGCTTGATGAACATGCTGCTGGGTGGGGATTGAAGAAGGAAGATGAACATATTGTCCTCACTTGGAAAGGGCACAATGTTGTTTTTGCATCTGTTTGGTTACCTGCTTGA 1407 0.4236 MMQFTPPIPPFHQNIIPLFSNPTMNQNQVPSPKPSPCPTGLIPTTKALSSSFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIALPDGDTNQRLAYSFLRALTVRAAKTGSCKMVEAMMGEESRSHLAIGTHKFNVIELANFVDLTPWHRFGFTAANTAILEACEGFSVIHIVDLSLTHCMQIPTLIDAISSRHEVPPLIKLTVAGDNCRDIPPVLDLSYDELGAKLVNFARSRNVIMEFRVVHSNYTDGFTSLMEHLKVQHLVYTSEAGASEALVINCHMMLHYIPDETLTHDMDTNSYVYDYGYHSSTLSLRSLFLKELRSLDPTIVVLVDEDADLTSRNLVCRLRSAFNYLWIPYDTMDTFLPRGSKQRQWYESDICWKIENIIAHEGLQRVERVEPKSMWEQRMRTANFHGVPISEDSVSEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASVWLPA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1329 468 ProSiteProfiles GRAS family profile. 49 466 IPR005202 -
Lal16g1329 468 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 466 IPR005202 -
Lal16g1329 468 PANTHER SCARECROW-LIKE PROTEIN 32 33 466 - -
Lal16g1329 468 Pfam GRAS domain family 58 465 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1329 Lal-Chr16 9576969 9578375 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1329 24 467 GRAS Transcription Factor Family AT3G49950 56.347 4.84e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal16g1329 GRAS 5.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1329 - - gmx:100814364 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1329 16 9576969 9578375 Lal16g1329 16 9576969 9578375 ECH