Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1327 ATGCATGATGAAAAATTAATTATTTTTAATATTCATGATTGTCTCTTCCGCGTTTCTCAATCTCTTTCATTTCCCTCTTCTCCATTCCGCTCTTCCAATTTACCCAAACCTTTCCTCCGCCGCCGTACCCCTACGACATCCACCGCCGATTTCGGCCTCCGCCGCCACCACCCGACACCCTGGCGCAGAAGATTGGGAAATCCACTCGCCGCCCCGGCGCTCCCTCCAAGGCGAGGGTTTATTCCGATGTCAATGTTGTTCGCCCTAAGGAATATTCGGACTATGAAAACCTCACCGTTCAGTGGGGGGAAAGGATCGGGAGTCGTGAAATATTATTGTGAAATCAGAGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGGGGAAAATACAGTGAGGTGTTTGAGGGTTTTCACTGCACTGATAATGAAAAATGTGTCATCAAGATCCTGAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTGCAGAACCTTTGTGGAGGGCCCAATATTGTAAAGTTGCTTGACATCGTTAGAGATCAGCAGTCGAAGACCCCAAGCCTTATATTTGAATATGTTAATAACACTGATTTTAAAGTGCTATATCCTACGTTATCAGACTATGATATACGATATTATATTCATGAACTTCTAAAGGCAAGAAGGCTTACATTACAAATAGTGCTTGCAAAAGACAATGCAGCTGCATATGCACTGGATTATTGCCACTCACAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTAATGATTGATCATGAGCAACGTAAGCTTCGCCTTATAGATTGGGGTCTTGCTGAGTTCTATCATCCAGGGAAAGAATATAATGTTCGCGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCACTAGATTTATGGAGTCTGGGTTGTATGTTCGCTGGGATGATATTCCGCAAGGAGCCATTCTTCTATGGGCATGATAATTATGATCAACTGGTCAAAATAGCTAAGGAATGCCTTTCATCTGTTTCCAACCTTTTGCATTATTTTTGTGGTGCTGATCTTGGAGAACAATCTGCTTCTTTGTTTATTATTTTTTCAATAATTGTTCATGCCTGCAAAGTCAATATGAATTCTCCTGAAGTAAATTTAGGGATGCAAAGGATGTTTTATCTGTTCTTTGATATGGTTCTTGGAACAGATGAATTAAGTGCATATCTGAATAAATACCGCATAGAGTTGGACCCAAATCTTGCAGCACTTATTGGAAGGCATAGCCGGAAGCCATGGGCAAAGTTCATTAATGGAGAAAATCAACACTTGGCTGTTCCTGAGGCCATTGACTTTGTTGACAAGCTACTACGGTATGATCACCAAGAACGACCAACTGCAAAAGAAGCAATGGCCCATCCTTATTTCAATCCAGTCAGAAATACAGAAAGTAGCAGAACTCGGACACATTGA 1494 0.415 MHDEKLIIFNIHDCLFRVSQSLSFPSSPFRSSNLPKPFLRRRTPTTSTADFGLRRHHPTPWRRRLGNPLAAPALPPRRGFIPMSMLFALRNIRTMKTSPFSGGKGSGVVKYYCEIREQDDYEVVRKVGRGKYSEVFEGFHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIHELLKARRLTLQIVLAKDNAAAYALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKECLSSVSNLLHYFCGADLGEQSASLFIIFSIIVHACKVNMNSPEVNLGMQRMFYLFFDMVLGTDELSAYLNKYRIELDPNLAALIGRHSRKPWAKFINGENQHLAVPEAIDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNTESSRTRTH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1327 497 Pfam Protein kinase domain 121 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1327 497 Gene3D Phosphorylase Kinase; domain 1 109 197 - -
Lal16g1327 497 SUPERFAMILY Protein kinase-like (PK-like) 106 487 IPR011009 -
Lal16g1327 497 SMART serkin_6 121 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1327 497 MobiDBLite consensus disorder prediction 35 52 - -
Lal16g1327 497 MobiDBLite consensus disorder prediction 477 497 - -
Lal16g1327 497 ProSiteProfiles Protein kinase domain profile. 121 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1327 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Lal16g1327 497 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Lal16g1327 497 MobiDBLite consensus disorder prediction 35 68 - -
Lal16g1327 497 Gene3D Transferase(Phosphotransferase) domain 1 407 484 - -
Lal16g1327 497 Gene3D Transferase(Phosphotransferase) domain 1 242 347 - -
Lal16g1327 497 CDD STKc_CK2_alpha 118 483 IPR045216 GO:0004674|GO:0006468
Lal16g1327 497 PANTHER CASEIN KINASE II SUBUNIT ALPHA 117 348 IPR045216 GO:0004674|GO:0006468
Lal16g1327 497 PANTHER CASEIN KINASE II SUBUNIT ALPHA 406 488 IPR045216 GO:0004674|GO:0006468
Lal16g1327 497 PANTHER BNAA04G13490D PROTEIN 406 488 - -
Lal16g1327 497 PANTHER BNAA04G13490D PROTEIN 117 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1327 Lal-Chr16 9474103 9480985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1327 119 345 Core Cell Cycle Gene Families AT3G48750 32.353 2.16e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lal16g1327 Pkinase 5.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1327 K03097 - han:110903987 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1327 16 9474103 9480985 Lal16g1327 16 9474103 9480985 ECH
Lal15g1309 15 14982599 14988266 Lal16g1327 16 9474103 9480985 LSH
Lal16g1327 16 9474103 9480985 Lal23g0131 23 1286877 1292720 LSH