Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1324 ATGATTAAACTTCATCATTTCATTTTCTTTTTTATTTTCTCATTCTCTCTATTCACTTCACTCAACACTGCGACACTTATCACAATTCAAATCAATGAATCTCACACACCAAGAAGATTCTTACACCAACCACTATTCCCGGTGGCTTCAACACAACCACCACCACCACCGCCTCCGCCGCCACAAGATACTACCCCTTCCTCTCCTGACATTCCTTTTTTCAACGAGTACCCCTCACCACCACCGCCGACGTCTGATCAGCTTCTGCCTTCAACCCCCGCCGCCGCAATAGCAACGAACCCAACGGCGACGCAAACTACGAAGCCGACGAAGAAGCTCGCAATTTATGTCTCCGTCGGAATCGTAACCGTTGGAATGTTATCTGCACTTGCGTTCTTCTTATTCAAGCACAGAACAAAGCACACTGTTGAAACAACTACAATTCAGAAACAAAACGAGGTTCTGAGTGAAAATTCCCATTTTGTCCCTGAGACTTTTAATAGTTTTACTCGACCACAACCGTCACCGCAATCGAGTTTCATTTACATTGGGACGGTTGAACCGAACCGGGTTTCGTTAAGTGAACCGGACCGAACCGGCAACGGTGGGAACCAGTCACCTCATCGTAAACTGAATAATTCAGTTAAGTTCTCGGATCGGTACCGTCCCAGCCCTGAATTGCAGCCGTTACCACCGTTGAGTAAACATTCCGATGAGAACCACCTTCCGCCGGCGGCATCTTCGTCGGAGGATTCCGATGAGGAAAGCCGCGAGACGAGGTTTCATTCACCTTCGCTTAGTCATGAGGAGGATAGCTATTATTACACGCCGGTTTCGCGTCATAGTTATGTGGATAACAGTAGCCCGGCGGCGGTGGCTGTTGCCGGAGTTCCGGTGGTTCCTTACTCGAAGAGAACTTCGCCGAAATCTAGGCTTTCGGCTTCGTCGCCGGACATCAGGCACATCATGATACCGTCTATAAAACATGCTTCTCAGCCACCGCCGTCATTGTTTCCGGCACCACCGCAACCTAGAAGGCCGAAATTCGCATCGCCTCCACCAGCACCCGATTTAAGACATCTTCATTCAGACGACTCCATGACTTCATTTAATCCTCCTCCGCCGCCACCGCCGCCTCCACCACCACCACGAGCAATACCTCACCGAAAAGCTTGGTCTCCAGCAAGAAGTGCATCCTCATCCGTCGGTGCCTTGAGAAAGAAGCAACAATGTTGGTCTCCAAGTCAAGAAGGAGGAGCGTCTACTTCTTCTACTAACAATGTGACGAAAGCAGCTTCAATAGAAGTAGATGAAACTGATGAAGGGAAACCCAAGTTGAAGGCTTTGCATTGGGATAAAGTGCCTGCAACCTCCGATCGCGCCACCGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGAGCCTGTTTGGTTGCAATTCTACAAATGCTGCACCTAAAAAGACTATTACTAGAAAGCCAGTGCTTCCTCCTGTTGAGCAAGAGAATAGGGTGTTAGACCCCAAGAAATCACAAAACATTGCTATACTTTTGAGAGCACTAAATGTGACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTTCTGACCTATTGGAAACTCTAGTAAAGATGGCTCCAACTAAGGAGGAAGAGATAAAACTTAAAAATTATGATGGTGAACTCTCAAGACTTGGTTCCGCCGAAAGATTTCTTAAAACAGTGCTTGATATCCCTTTAGCCTTTAAAAGAGTCGAAGCCATGCTTTATAGAGCTAATTTTGAAGCTGAAGTTAACTACCTTAGGAAGTCTTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAAGAACAGCCGGTTATTCTTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTCGGCACCAATCGTGGCGATGCTAAATCTTTCAAACTTGAAACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATATGAAGGAAGTTCAGGTGGTGAATCTTCAAATGACAATGCTCAGAACCAAATGACATCCGAATTCAATGAGGATGAGTTCAGAAAGAAAGGGTTGCAGGTTGTAGCTGGACTGAGTAGAGACCTTGGTAATGTAAAGAAAGCAGCAGGAATGGATTCAGATGTCTTAAGCAGTTATCTCTCAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATCAAAAGCCAGATATGCAAGGGACTTTCTTTAACTCGACAAAGCTATTTCTGAAAGACGCTGAAGAGAAAATCATTAGGATCAAAGCTGATGAGAAGAAAGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAGCAAAGGAAGAAGCACACCCTTTCAGAGTTTTTATGATTGTAAGAGACTTTCTTAATATTTTGGATCATGTTTGCAAAGAAGTTGGAAAGATGCAGGACAGGACTATGATTGGTTCAGCCAGATCCTTCAGGATAGCTGCAAGTGCATCATTACCTGTTCTCAGTAAGTACCATACAAGACAAGATAGAAGTTCAGGTGAAGAAAGTTCATCCCCCTAG 2661 0.4483 MIKLHHFIFFFIFSFSLFTSLNTATLITIQINESHTPRRFLHQPLFPVASTQPPPPPPPPPQDTTPSSPDIPFFNEYPSPPPPTSDQLLPSTPAAAIATNPTATQTTKPTKKLAIYVSVGIVTVGMLSALAFFLFKHRTKHTVETTTIQKQNEVLSENSHFVPETFNSFTRPQPSPQSSFIYIGTVEPNRVSLSEPDRTGNGGNQSPHRKLNNSVKFSDRYRPSPELQPLPPLSKHSDENHLPPAASSSEDSDEESRETRFHSPSLSHEEDSYYYTPVSRHSYVDNSSPAAVAVAGVPVVPYSKRTSPKSRLSASSPDIRHIMIPSIKHASQPPPSLFPAPPQPRRPKFASPPPAPDLRHLHSDDSMTSFNPPPPPPPPPPPPRAIPHRKAWSPARSASSSVGALRKKQQCWSPSQEGGASTSSTNNVTKAASIEVDETDEGKPKLKALHWDKVPATSDRATVWDQLKSSSFQLNEDMMESLFGCNSTNAAPKKTITRKPVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGSDLLETLVKMAPTKEEEIKLKNYDGELSRLGSAERFLKTVLDIPLAFKRVEAMLYRANFEAEVNYLRKSFQTLEAASEELKNSRLFFKLLEAVLRTGNRMNVGTNRGDAKSFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRYEGSSGGESSNDNAQNQMTSEFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYLSKLEMGLDKVRLVLQYQKPDMQGTFFNSTKLFLKDAEEKIIRIKADEKKALFLVKEVTEYFHGDTAKEEAHPFRVFMIVRDFLNILDHVCKEVGKMQDRTMIGSARSFRIAASASLPVLSKYHTRQDRSSGEESSSP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1324 886 MobiDBLite consensus disorder prediction 693 710 - -
Lal16g1324 886 Gene3D Formin, FH2 domain 431 847 IPR042201 -
Lal16g1324 886 Pfam Formin Homology 2 Domain 438 835 IPR015425 -
Lal16g1324 886 PANTHER FORMIN-LIKE PROTEIN 7 886 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 189 269 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 192 212 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 46 91 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 394 428 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 693 712 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 332 354 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 326 428 - -
Lal16g1324 886 ProSiteProfiles Formin homology-2 (FH2) domain profile. 436 861 IPR015425 -
Lal16g1324 886 MobiDBLite consensus disorder prediction 369 388 - -
Lal16g1324 886 PANTHER FORMIN-RELATED 7 886 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal16g1324 886 MobiDBLite consensus disorder prediction 248 267 - -
Lal16g1324 886 SUPERFAMILY Formin homology 2 domain (FH2 domain) 373 848 - -
Lal16g1324 886 MobiDBLite consensus disorder prediction 48 88 - -
Lal16g1324 886 SMART it6_source 436 850 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1324 Lal-Chr16 9397001 9402008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1324 383 876 FH2 protein (formin) Gene Family AT5G67470 66.400 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1324 - - gmx:100803578 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1324 16 9397001 9402008 Lal16g1324 16 9397001 9402008 ECH
Lal15g1310 15 15026419 15034156 Lal16g1324 16 9397001 9402008 LSH
Lal16g0254 16 1523382 1528161 Lal16g1324 16 9397001 9402008 PCT
Lal15g1310 15 15026419 15034156 Lal16g1324 16 9397001 9402008 PCT
Lal23g1297 23 13964165 13968807 Lal16g1324 16 9397001 9402008 PCT
Lal16g1324 16 9397001 9402008 Lal16g0254 16 1523382 1528161 PCT
Lal16g1324 16 9397001 9402008 Lal15g1310 15 15026419 15034156 PCT
Lal16g1324 16 9397001 9402008 Lal23g1297 23 13964165 13968807 PCT