Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1314 ATGCAGAATCTATATATCAAATATCAAATATGTTATGGTATGTTGGAAGAAGGACATAGTGATAATAAAGGGTTATTTTATTTCATAAAGACCATGTCTTTTTCTATGAAATGTTTCATGTGGTTACATTTTGTTATCAGCATGATCTTGATCTTGTCAAAGCCAACAATTTCTTCCCATATCATAAGGTCTTTGCCTGGGTTTCCTGGTAATCTTCCTTTCAAATTGGAGACTGGGTACATTGGTGTGGGTGAGAATGAAGTGGTGCAGCTGTTTTATTACTTTGTTGAATCAGAAGGGAATCCAACAGAGGATCCTCTTTTACTTTGGCTTTCTGGTGGCCCTGGATGTTCTGGTTTGTGTGGCCTTTTCTTTGAAATAGGCCCTCTGAAATTCAATATGGTGAAGTATAATGGAAGTTTGCCAACATTTTCTCTCAATCAGCACTCATGGACTAAAGTTTCAAGTATAATCTTTATTGATGCACCGGTTGGCTCTGGATTCGCGTATTCAAGAACCATGTCCGGGTACAAGACAACAGACAAAATCCATGCCCAACATTGTCACAGTTTCATGAGAAAGTGGTTGGTATATCACCCCAAATTTATTGGTAATCAATTCTACATTGGAGGTGACTCATATGGTGGCATACCTGTACCAATCCTAACCAAATATATCTCAGACGGTAACGAAGCAGGCGAAAAACCGAAAATAAATAATAAAGGATATATGGCTGGGAACCCAGCAACAGATCCAAATTTTGATTGGAATGCTAAGATTCCATTTGTTCATCGCATGGCTCTTATTTCTGACGAGTTGTACAAGTCAGCGAAAATGACTTGCAGAGGAGAGTATGTCAATGTGAAGAAAGACAATCTAGCCTGTCAAAATGATCTCCAAGCAATCACAGAGTGCATCCGTAATATAAACGAGGAACATGTTTTAGAGCCTAATTGCCCAACAGATGTGTTTTTATTCAATTACTCTACGGCCGACCAGAAAGCCCGCGAAGAATTTCAGAGGATGGTGTTGCATGCTCCACTAAAAATCTTACAGTTTGGGTGCAGGAACTATGAGAATCTATTGCTGCACGAATGGGCCAACAATGTTCATGTTCAAAAGGCGTTACATGTCCGTTTGGGACATGTTGCTGTTTGGATAAGGTGTAACCGCAGCATAATTCACACAAACGATGTCCCAAGTGTTCTTAGCTATCATCGTTATCTTAGAACGAAACATATCCGGGCTCTTATATACAGTGGTGACCATGACATGCAAATGTCATACTTAGGAACTCTGAGATGGATCAATTCTCTGAATTCTACCATTGTGGAGGAATGGAAACCTTGGATTGTTAGGGACCAAATTGCAGGCTATGTACAAGAGTACTCCAACTATATCACTTTTGCCACTGTCAAGGTAAAGCCAGAACTCTACTTCTTTCGCCTGGTTCGGCAGGCTTATGTGGAGAAGGCATGTTGGGAAGGAGCTGGTCACACAGCCCCAGAGTACAAGAGAAAGGAATGCTTTGAAATGTTCAAGAGGTGGATCTCTCATAAGCCTTTGTCATTTTTGGATCCTAAATTCCCTTTCTCCAATGAGCATAATGCAAACCTTACTAGCATCAAGGACAATTTAGGGAATGAGTTGAGCCTACTTTAA 1662 0.4025 MQNLYIKYQICYGMLEEGHSDNKGLFYFIKTMSFSMKCFMWLHFVISMILILSKPTISSHIIRSLPGFPGNLPFKLETGYIGVGENEVVQLFYYFVESEGNPTEDPLLLWLSGGPGCSGLCGLFFEIGPLKFNMVKYNGSLPTFSLNQHSWTKVSSIIFIDAPVGSGFAYSRTMSGYKTTDKIHAQHCHSFMRKWLVYHPKFIGNQFYIGGDSYGGIPVPILTKYISDGNEAGEKPKINNKGYMAGNPATDPNFDWNAKIPFVHRMALISDELYKSAKMTCRGEYVNVKKDNLACQNDLQAITECIRNINEEHVLEPNCPTDVFLFNYSTADQKAREEFQRMVLHAPLKILQFGCRNYENLLLHEWANNVHVQKALHVRLGHVAVWIRCNRSIIHTNDVPSVLSYHRYLRTKHIRALIYSGDHDMQMSYLGTLRWINSLNSTIVEEWKPWIVRDQIAGYVQEYSNYITFATVKVKPELYFFRLVRQAYVEKACWEGAGHTAPEYKRKECFEMFKRWISHKPLSFLDPKFPFSNEHNANLTSIKDNLGNELSLL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1314 553 Gene3D - 355 522 - -
Lal16g1314 553 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 520 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 SUPERFAMILY alpha/beta-Hydrolases 62 522 IPR029058 -
Lal16g1314 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 159 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 170 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 195 220 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 PRINTS Carboxypeptidase C serine protease (S10) family signature 489 502 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 Pfam Serine carboxypeptidase 66 473 IPR001563 GO:0004185|GO:0006508
Lal16g1314 553 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 46 520 - -
Lal16g1314 553 Gene3D alpha/beta hydrolase 56 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1314 Lal-Chr16 9312707 9317442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1314 366 522 Calmodulin-binding Proteins AT2G22960 43.949 1.04e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1314 K16296 - tcc:18611311 542.347