Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1292 ATGTTCCAATCTCAGCAGCAGCAACAACAAAATGAGGCTATATGGTTGAGGAACTACGACTTAAAAGTCTTGAGAATCAAGCAAAATGATTACTTCACTGAGCTAAGAAAATTTATTAGCAAATATGGGAATTTTCCTAACCAATATCACTCTGGGTTGGTGCCAATGCCGCCACCGCCACCATCACCACCGGCTCCTCCGGTTCAAAGACATAAAAGAATATTATGGACAGAAGATGAGCATAGACTATTTGTTCATGGGCTGGACGTATATGGAAAAGGAAAATGGAAGAGCATATCAATAAATATTCTTCCATCAAAGACACCATCACAAATAGCAAGCCATGCACAGAAATATTTCCTACGTCAAAGTGCTGCAGAAAAGAAAAGAAGGAGTATTCATGACAACCACAACAACATGATCATGATGATGGAACCTAATCACAATCACAACCATGCTTCTATAGTACCAATAGTGGCACAAGAATTGCCACATGCAGTAGCAACAAATGTAGAACCACTTAATATTTTGGCTCCACAAATATATGATACAGTACATGCAGCAACAAGAAATGCAGAACCACTGAATAATTTGGCTCCACAAATATATGATACAGTACATGCAGCAGCAAGAAATGCAGAACCACTGAATAATTTGGCTCCACAAATAGATGATACAGTATATGCAGCAGCAAGAAATGCAGAACCACTGAATAATTTGGCTCCACAAATAGATGATACAGTACATGCAGCAGCAAGAAATGCAGAACCAATGAATATTTTGGCTCCACAAATAGATGATACACATGCAGCAGCAACAAATGCAGAAGCACTTGATAATTTGGCTCAAGAAATATATGATATTGATTGGGAACATATTGGTTTGGATTTCGAATTGCAACGAATGGAGCTAGAAGATTTCGGTTGGGACATGGCAAACAGAGAAGAAGTTGACATGAACAACAATAACATATTCTCCTTCAGATATAGCTAG 993 0.3837 MFQSQQQQQQNEAIWLRNYDLKVLRIKQNDYFTELRKFISKYGNFPNQYHSGLVPMPPPPPSPPAPPVQRHKRILWTEDEHRLFVHGLDVYGKGKWKSISINILPSKTPSQIASHAQKYFLRQSAAEKKRRSIHDNHNNMIMMMEPNHNHNHASIVPIVAQELPHAVATNVEPLNILAPQIYDTVHAATRNAEPLNNLAPQIYDTVHAAARNAEPLNNLAPQIDDTVYAAARNAEPLNNLAPQIDDTVHAAARNAEPMNILAPQIDDTHAAATNAEALDNLAQEIYDIDWEHIGLDFELQRMELEDFGWDMANREEVDMNNNNIFSFRYS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1292 330 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Lal16g1292 330 PANTHER TRANSCRIPTION FACTOR KUA1 68 175 - -
Lal16g1292 330 SUPERFAMILY Homeodomain-like 69 124 IPR009057 -
Lal16g1292 330 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 123 IPR006447 GO:0003677
Lal16g1292 330 CDD SANT 76 120 IPR001005 -
Lal16g1292 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 124 IPR017930 -
Lal16g1292 330 SMART sant 72 122 IPR001005 -
Lal16g1292 330 Gene3D - 75 125 - -
Lal16g1292 330 ProSiteProfiles Myb-like domain profile. 68 120 IPR001005 -
Lal16g1292 330 PANTHER TRANSCRIPTION FACTOR SRM1 68 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1292 Lal-Chr16 9163235 9164227 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal16g1292 Myb_DNA-binding 7.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1292 - - lang:109354044 107.457