Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1278 ATGGATTTTCTCCATTTCATTGCTCTCATTTTCATGTTGAGCTTCCATATTCTTTATGCTCAAGCAAGTGAAATGCCTCATACCACTTTGAGCATTGAGAAAAGTAATTCAAAAATATACATTATCCATGTGAGGCAGCCAGAGAGAAAGCTATTTGCTCAATCAGAAGATTTGGAAAGCTGGTACCATTCATTCATGCCACCAACTACTATGAGCACTAAGGAACAACCACCAATAATTCATTCATACCATCATGTGCTGAGTGGTTTTGCTGCAAGACTCACTGAAGAGGAGCTGAGAGCTATAGAAAATAAGAATGGCTTCATTTCGGCTCATCCGGAAAGGATGCTGCACCCTCAAACCACACATACCCCACAATTCTTGGGGTTGTTGCAATCAAATGGGCTGTGGAAAGAATCAAACTTTGGAAAAGGAGTTATTATTGGGCTGCTGGACTCGGGTATCGAACCTGATCATCCTTCATTTAGTGATGCAGGAATCTCACCCCCACCTCCGAAATGGAAAGGGAGGTGTGAATTTAATGGGACAGCTTGTAACAACAAACTGATTGGCGCAAGGTCGTACAAAATTGCGGGTAAAGCAATGACAGAAGAGTCACCAATTGACGATGATGGCCATGGGACTCACACAGCAAGCACAGCAGGTGGTGCTTTTGTGAACCATTCAGAAGTGTTAGGAAATGCAAAAGGCACAGCAGCAGGGATAGCCCCTTATGCTCACCTCGCAATATACAAAGTATGTTATGGACAAAATTGTCCCGAGAGTATTATATTAGCAGCATTAGATGCAGCTGTAGAGGATGGTGTGGATGTACTATCAATATCCCTTGGTCAGGATGAACCGATTCCATTTTTCAATGATAACATCGCAATAGGTGCATTCACAGCAACCCGGAAGGGAATATTAGTGAGTTGTGCTGCAGGAAACTATGGCCCTCTATATGGCACCTTAGTTAATGGAGCCCCATGGATTCTCACAGTTGGAGCAAGCACTACCGACAGAAGCATTGTAGCGACAGCAAAGCTTGGAGATATGCAAGAATTTGATGGCGAATCAGTCTTCCAGCCTTCTAATTTTTCTCCAACTTTGCTGCCCTTAGCATATGCTGGAAAGGGTGGCAAACAAGCATCTGCAACATGTAATAGCGGATCCTTGAGTGACATTGAGTTCAGAGGCAAGGTAATATTGTGCGAGAGAGGAGGGGGTATAGGAAGAATTGAAAAAGGAAATGAAGTGAAAAGAGTAGGTGGTGCAGCTATGATTATCATCAATGACGAAATCAATGGCTTCAGTCTCGAAGCTGATGCACATGTTCTACCTGCAACCCATGTAAGCTATGATGCGGGACTGAAGATTAAGGCTTATATAAACTCCACTGCAACACCTACAGCAACCATTTTATTTAAGGGAACGATCCTCGGAAACTCTCTATCTCCTGCTGTTGCATCTTTCTCTTCAAGAGGTCCAAACTTAGTAAGTCCTGGCATTTTGAAACCAGATATCATAGGGCCAGGTGCAGGCATCCTAGCTGCTTCACCATTCACGATCGATAACAGCAGCAATTCAAAGTCCAATTTCAACATTATGTCTGGAACATCAATGGCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCCCATCCTGACTGGTCTCCGGCTGCGATAAAATCTGCCATAATGACTTCTGCAGACCTACTACATGTAGGACTTGAACCTATTGTTGACGAAAAACTCAAGCCTGCAGATATCTTCGCGACAGGTTCTGGCCATGTGAATCCATCAAGAGCAAATGACCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACCCTATCTGTGTGGTTTGGGCTACAGAAATAGTGAAGTTGGGATCATTGCACAGAGAAAAATCAATTGCGCCACAATTTCAAACATTCCCGAAGGAGATCTCAATTATCCTTCATTTTCAGTTGTGCTTGGTCCCTCACAGACATTCACAAGAACTGTGACAAACGTCGGTGAGGCCTATTCATCCTATGTTGTCATTGTTACAGAACCAGAAGGGGTTGAAATGATGGTCCATCCGAATGAACTTCATTTTTCAGAAGTGAACCAAAAAGAGACATATTCAGTGACATTCAACCGTATAGGGTTAGGTAATAAGACAGGGGAACATGTTCAAGGGTTTGTAGAATGGGTATCCGACGAAAACTCTGTAAGGAGCCCAATCTCTGTCACATTTGAATAA 2262 0.4306 MDFLHFIALIFMLSFHILYAQASEMPHTTLSIEKSNSKIYIIHVRQPERKLFAQSEDLESWYHSFMPPTTMSTKEQPPIIHSYHHVLSGFAARLTEEELRAIENKNGFISAHPERMLHPQTTHTPQFLGLLQSNGLWKESNFGKGVIIGLLDSGIEPDHPSFSDAGISPPPPKWKGRCEFNGTACNNKLIGARSYKIAGKAMTEESPIDDDGHGTHTASTAGGAFVNHSEVLGNAKGTAAGIAPYAHLAIYKVCYGQNCPESIILAALDAAVEDGVDVLSISLGQDEPIPFFNDNIAIGAFTATRKGILVSCAAGNYGPLYGTLVNGAPWILTVGASTTDRSIVATAKLGDMQEFDGESVFQPSNFSPTLLPLAYAGKGGKQASATCNSGSLSDIEFRGKVILCERGGGIGRIEKGNEVKRVGGAAMIIINDEINGFSLEADAHVLPATHVSYDAGLKIKAYINSTATPTATILFKGTILGNSLSPAVASFSSRGPNLVSPGILKPDIIGPGAGILAASPFTIDNSSNSKSNFNIMSGTSMACPHLSGIAALLKSSHPDWSPAAIKSAIMTSADLLHVGLEPIVDEKLKPADIFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYRNSEVGIIAQRKINCATISNIPEGDLNYPSFSVVLGPSQTFTRTVTNVGEAYSSYVVIVTEPEGVEMMVHPNELHFSEVNQKETYSVTFNRIGLGNKTGEHVQGFVEWVSDENSVRSPISVTFE 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1278 753 Gene3D Peptidase S8/S53 domain 145 620 IPR036852 GO:0004252|GO:0006508
Lal16g1278 753 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lal16g1278 753 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Lal16g1278 753 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Lal16g1278 753 CDD Peptidases_S8_3 117 574 IPR034197 -
Lal16g1278 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 750 IPR045051 -
Lal16g1278 753 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 35 750 - -
Lal16g1278 753 SUPERFAMILY PA domain 373 465 IPR046450 -
Lal16g1278 753 ProSiteProfiles Serine proteases, subtilase domain profile. 125 607 - -
Lal16g1278 753 CDD PA_subtilisin_like 346 473 - -
Lal16g1278 753 Gene3D - 340 480 - -
Lal16g1278 753 Pfam Subtilase family 143 574 IPR000209 GO:0006508|GO:0008236
Lal16g1278 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 119 IPR037045 -
Lal16g1278 753 Gene3D - 624 752 - -
Lal16g1278 753 Pfam Fibronectin type-III domain 654 750 IPR041469 -
Lal16g1278 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Lal16g1278 753 SUPERFAMILY Subtilisin-like 120 611 IPR036852 GO:0004252|GO:0006508
Lal16g1278 753 Pfam PA domain 372 459 IPR003137 -
Lal16g1278 753 Pfam Peptidase inhibitor I9 40 117 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1278 Lal-Chr16 9008500 9010761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1278 6 753 Subtilisin-like Serine Gene Family AT1G04110 43.257 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1278 - - gmx:100812208 1124