Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1275 ATGACTCTCCTCTCAACTTTTTTCCATAACATAAAGTATTCATCATGGTCTTATACAAATCTCCTTCCCTTATTGTTCATTTTAACAATCACTCTCTACTCATGCCTTTTCTTTTTTAAACTCAAAGCCCAAAAGAATCTCCCACCAGGCCCGCCGGGCCTCCCGTTTTTCGGGAACCTTCTATCCCTAGACCCCGAACTCCACTCTTATTTTGCCGGTCTGGCCCGAACCTACGGCCCGGTTCTAAAACTCCGTCTCGGAGGAAAACTCGGAATAATAATCACTTCCCCTTCCGCGGCCCGCCAAGTTTTAAAAGACCACGACACCGTTTTCGCCAACCGTGACGTCCCCGCCGCAGGCCGCGCCGCCACGTACGGCGGAAAAGATATCACATGGACACCGTACGGGCCAGAATGGAGGATGTTGAGGAAAGTTTGCGTGCTCAAGATGCTGAGCAACACATCCTTGGACTCAGTCTATGACCTAAGAAGAAACGAGGTTCGGAAAATGGTTGGGTTTATTTTGGGCTGGGCCGGGTCGATGGTGAATATTGGGGAGCAAGGTTTTCTGACGCAGCTGAACGTGATAACGAATATGATGTGGGGCGGGGCGGTGGAAGGGGCGGAGAGGGAGAGGTTGGGGGCGGTGTTTAGGAAGATGGTGGCGGAGATGACGGAGCTGTTGGGGAAACCGAATGTGTCGGATTTTTTTACCGGGTTGGCCCGGTTCGATTTGCAAGGTGTGGAGAAAGAGATGAAGAAGTTGGTGGTGAAGTTTGATGAGATATTTGAAAAGATGATCGGTGAAAGGGTTAAGATAGAAAAAGAAGGTGAAGTAAAGAAGGATTTTTTGCAATTTTTGTTGAATATGAAAGAGGAAGCTGATTCCAAAACAACACTCACCATAACCCATGTCAAGGCCTTGCTTATGATGGTGGTGGGTGGATCGGACACATCATCCAACACAGTTGAGTTTGCAATGGCAGAAATGATGTACAAACCAGAAGTAATGAAGAGAGTCCAAGAGGAACTAGAAGCTACAGTGGGCAAAGACAACATAGTAGAAGAGTCACACATTCATAAGTTATCTTACTTACATGCTGTAATGAAAGAAGTTCTTAGGTTGCACCCTGTGCTTCCACTTCTAGTTCCTCATTGCCCAAATGAAACAACCCTTGTGGAAGGGTACACAATCCCAAAGGGTTCAAGGGTATTTGTGAATGTGTGGGCTATACATAGAGACCCTTCCATTTGGGACAAACCATTAGAATTTGACCCTACAAGGTTCTTAGATACCAAATGGGATTTCAGTGGAAATGACTTCAACTATTTCCCTTTTGGGTCTGGAAGAAGAATATGTGCAGGGATAGCAATGGCCGAGAGATCAGTTTTATATTTTCTTGCAACACTTGTGCACTCATTTGATTGGACAATACCCCAAGGTGAAAAATTTGATGTGTCAGAGAAATTTGGTATTGTTCTAAAAAAGAAAGTACCTCTAGTTGCTATCCCCACCCCAAGATTGTCGAATCTTGATTTATATAAATAG 1548 0.4509 MTLLSTFFHNIKYSSWSYTNLLPLLFILTITLYSCLFFFKLKAQKNLPPGPPGLPFFGNLLSLDPELHSYFAGLARTYGPVLKLRLGGKLGIIITSPSAARQVLKDHDTVFANRDVPAAGRAATYGGKDITWTPYGPEWRMLRKVCVLKMLSNTSLDSVYDLRRNEVRKMVGFILGWAGSMVNIGEQGFLTQLNVITNMMWGGAVEGAERERLGAVFRKMVAEMTELLGKPNVSDFFTGLARFDLQGVEKEMKKLVVKFDEIFEKMIGERVKIEKEGEVKKDFLQFLLNMKEEADSKTTLTITHVKALLMMVVGGSDTSSNTVEFAMAEMMYKPEVMKRVQEELEATVGKDNIVEESHIHKLSYLHAVMKEVLRLHPVLPLLVPHCPNETTLVEGYTIPKGSRVFVNVWAIHRDPSIWDKPLEFDPTRFLDTKWDFSGNDFNYFPFGSGRRICAGIAMAERSVLYFLATLVHSFDWTIPQGEKFDVSEKFGIVLKKKVPLVAIPTPRLSNLDLYK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1275 515 PANTHER OS08G0547900 PROTEIN 18 515 - -
Lal16g1275 515 Pfam Cytochrome P450 48 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 SUPERFAMILY Cytochrome P450 48 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g1275 515 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 18 515 - -
Lal16g1275 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Lal16g1275 515 Gene3D Cytochrome P450 40 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1275 Lal-Chr16 8984819 8991882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1275 20 514 Cytochrome P450 AT4G12300 57.570 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1275 - - gmx:100787507 753.051