Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1237 ATGTTGGCGGGGTGTTCTAGTTCAACATTATTGTCACCAAGGCACAGATTAAGGAATCAAGTAACATCATCAACACATTTTCAGAATCAAGCTTGCAATCTCCACCTACCTTCTTCCATGAACACACATAGATTGGATTTACCATCATCATGCAGTTTTCCAAGGAAAGAAACCCCACGTTCTCAACAACAATCTTTGAAGCCTATGACACTCTCAGTGGAAAAACCAATGGAAGCCAAGACCAGCACATGTTCTTTGAAGAAGCACAGTACTCAGACAATGGCATTTGTTGAATGCAAGGGAGAGATCAATGATGGGTATTGGGAAAAAAAGGGTGTTAAGGGTTTGAAGAGGCTTGCAGAACATGGTTCTGTTGATGAATCTGTAGCCAGCAGAGCCAAGAGGAAAAAGGGTAGTAGTGATAATAGTGATATTCTTGAAGGAGATGCTTTGAGTTTAGCACAAATGGGTGCTGGTAACTTTTGGTTTCAACACCCTCAACTTCCTTTGTCTCTAACTGGTCCAGAGGAAGATGAAAGGGTATGCTTTGTTCCTAGTGAAGTGGTTTCTGCACCTTTGCCATTATCCAATAATCATCCATGGGTGGAAGTGGAGTATGGTGTGACTAAGATCAAGAATTTTGGTGAGAAGAATGTTGTTGAGGGTAGCCAATCACATGTGAAGGAAGGTTCAGTGTCCAATGCTTCATCAGAAAGCCAAAGCTTGAGTTTGAGGCTGAATGAGAATGCACCATCAGAACATGAAGTTGGTAATGGTTCAGGGGATCCTTATCATCATGAAGGCACAGAGGTGGAGACAGGAGAGGAGGATGACCGTGAGAAGCATCGCGAATTTGAGCTGGTTAGTTTTCTAACAGCTTGTGTTGATGCTATTGGATCAAGGAATGTTGCTGCAATCAACCATTTTATAGCAAAATTAGGTGAACTTGCATCTCCGAGAGGAACCGCGATAAGCCGGATTTGTGCTTATTTTACAGAAGCCTTAGCCATAAGGGTTACCAGGCTCTGGCCTCAGATTTTTCATATCACCATTTCAAGGGAGCTAGAAAGGGTGGTGGAAGATGAAACTGGCAATGTACTAAGGCTTCTGAATCAGATTAGTCCAATTCCCAAGTTCCTTCATTTTACTTCCAATGAGATGCTGTTGAGATCTTTTGAAGGGAAAGACAAGGTTCACATTATAGATTTTGACATAAAGCAAGGGCTTCAATGGCCTAGTTTGTTTCAAAGTTTAGCTTCAAGGACTAACCCTCCAAGCCATGTTAGAATCACAGGCATAGGGGAATCCAAGCAAGAGCTGAATGAAACTGGTGACAGGCTGCAAGGTTTTGCTGAGGCATTGAACCTTCCCTTTGAGTTTCATCCAGTTGTCGATAGACTCGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGACCATGAAAGTGTGGCTGTGAACTGTGCTTTGCAGCTCCACAAGACCCTTTATGATGGAACTGGAGGAGCACTGAGGGATTTTCTCGGCCTCATTCGTAGCACAAATCCTACTGTCATCGTGATGGCTGAGCAAGAAGCAGAACACAATGACCCAAGATTGGAAACAAGAGTGTGCAATGCCTTGAAATATTACTCAGCTTTGTTTGATTCAATTGATCACTGTCTTCCACAAGAGAGCCCTATGAGAATAAAGATAGAGGAGATGTATGCAAGAGACATAAGGAACATCATTGCTTGTGAAGGAAGTCACAGGTTGGAGAGGCACGAGAGCTTTCGGTATTGGAAGAAGATGATGGCAGAACAAGGAGGATTCAGATGCATGGGAATTACTGAGAGGGAAATGTTTCAAAGCCAGATACTAATGAAAATGTACCCTTGTGAGAATTACAATGTGAAGAAGCAAGAGAATGAAGAAGCAATAGGAGTTACTTTGAGTTGGCTAGAACAACCTCTATATACAGTTTCTGCATGGACACCAATTGATGCTGTTGGCACTTCATACTCTTTTTCTCACCCAACATAA 2019 0.4255 MLAGCSSSTLLSPRHRLRNQVTSSTHFQNQACNLHLPSSMNTHRLDLPSSCSFPRKETPRSQQQSLKPMTLSVEKPMEAKTSTCSLKKHSTQTMAFVECKGEINDGYWEKKGVKGLKRLAEHGSVDESVASRAKRKKGSSDNSDILEGDALSLAQMGAGNFWFQHPQLPLSLTGPEEDERVCFVPSEVVSAPLPLSNNHPWVEVEYGVTKIKNFGEKNVVEGSQSHVKEGSVSNASSESQSLSLRLNENAPSEHEVGNGSGDPYHHEGTEVETGEEDDREKHREFELVSFLTACVDAIGSRNVAAINHFIAKLGELASPRGTAISRICAYFTEALAIRVTRLWPQIFHITISRELERVVEDETGNVLRLLNQISPIPKFLHFTSNEMLLRSFEGKDKVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLQGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDHESVAVNCALQLHKTLYDGTGGALRDFLGLIRSTNPTVIVMAEQEAEHNDPRLETRVCNALKYYSALFDSIDHCLPQESPMRIKIEEMYARDIRNIIACEGSHRLERHESFRYWKKMMAEQGGFRCMGITEREMFQSQILMKMYPCENYNVKKQENEEAIGVTLSWLEQPLYTVSAWTPIDAVGTSYSFSHPT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1237 672 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 661 IPR005202 -
Lal16g1237 672 ProSiteProfiles GRAS family profile. 278 657 IPR005202 -
Lal16g1237 672 MobiDBLite consensus disorder prediction 122 143 - -
Lal16g1237 672 MobiDBLite consensus disorder prediction 222 279 - -
Lal16g1237 672 MobiDBLite consensus disorder prediction 222 248 - -
Lal16g1237 672 PANTHER SCARECROW-LIKE PROTEIN 28 6 661 IPR030027 -
Lal16g1237 672 MobiDBLite consensus disorder prediction 259 279 - -
Lal16g1237 672 MobiDBLite consensus disorder prediction 122 145 - -
Lal16g1237 672 Pfam GRAS domain family 287 657 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1237 Lal-Chr16 8630188 8632206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1237 1 657 GRAS Transcription Factor Family AT1G63100 54.913 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal16g1237 GRAS 2.9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1237 - - lang:109333178 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g1370 15 15835226 15837301 Lal16g1237 16 8630188 8632206 LSH