Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1211 ATGGATAACTTAAATGGGTTTCCTCGGGGAAGTGTGTTTGAAGATAGCCAGCTTGCGTCTCTGGTGAATTGGATAAATGCGGTGCTTCCTAACTTTAATCTTCCCTTAGAAACTTCAGAGGAGGAATTGAGATCGTGGCTGAGGGATGGATCTGTATTATGCAGTATTTTGGACAAGCTGGTTCCTGGTTCAGTGGAAAGAGGAAATGGTTCTTTGGAAGAGCTAGTGGGTGTTAAAAGGTTTCTGGTTGCATTGGATGATTTGGCATTGCCTGGATTTGAATTGTCAGACCTTGAGCAGGGATCCATGTTGCCTGTGTTGCACTGCCTTGAGACTCTGAAAACTCATTTTGCTTGTAATGTTGCTCGAGGAAATATCCAAAGTTCTAGAAAGAGGTGGGACCGGTCAGATCTAACACCCCTAGAGGAAACTGATAGTTGCCTCAAGGATGCTTCAAAAATCCAACGTGCTGTTGACAGTTCTGTTGTATCAGATGAAGTTGCTTCCTTAGATGGATTAAAATCTAATGAAATGTCCCAATTGAAGCGAGGATCGCATGTGGATCTTTCAGATGCTAAACTTATGGAATTAGTAAAATCAAACAGTTTGGATACTACCTCAACTGAATTGCTTTTTAACATAGGAAATAGGATCCTTGGTGATATCTTTGAAAGGAAGAATGGAGATGTACCTCATGCTCAGCGTGCAGTATGCTTGTTGAGGAAAATTTTGCAAGTAATTGAGCTGCGCTTTTCAAATCAAGCAGAAGGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAATCGAGAATGAATGCACTTGAAACCCTTGCTGCAGGGACAACTGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGTTGAAGTTTACTTTGCAGCTTGAACAAAATAAATTTGAGGAGAAGAAGAAACTCGAGGATCAGGATTTTTCTCGATTAAAGAAAGAAAAAATTCGTAATGAAATTGAAATTTCTGCATTGAAGCAAGAGTTGGAAATGGCCAGAGGAACGCATGAAGAACAGGTTTTGCAGTTGGAATTGCAAGCTAATGAATCTAAAGCTGAATATGAGAAAAAGATACAGGAACTTGAGCGTCATTTGGCCAACACAAGGAAACGTGTGAAGGATCTGGAGGCATCTTCAGAATCCAGATATTTGAAATGGAAGAATAAAGAACATACCTATCAAAGTTTTTTAAATTCCCAACATAGAGCTATCCAGAAATTGAAAGCTGGGATGAAGTCCATAAAAAATGAAGTGATAAAAACAAAAGGAAGCTACATGGAGGAATTCAAGTACTTTGGAATCAAGGTTAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTGGCAGAAAATCGAAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATCCGGGTATATTGTCGAATTAGACCATTTCTTCCTGGGCAAAGTCAAAAACACTCAACAGTTGAGTTTGTTGGTGATGATGGAGATTTAGTTGTTAGCAATCCTCTTAAACCAGGAAAAGAAAGTCGCAAACATTTTAAATTTAACAAGGTTTTTGGTCAAGTATCTACTCAAGAGGAAGTATTCATTGACACTCAACCACTAATTCGTTCTGTTCTTGATGGATACAACGTGTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACGTATACAATGAGTGGACCAAGCCTATCATCAAATTCAGATTGGGGAGTAAACTATCGAGCACTTCATGATCTTTTTCATATCTCCCAGACTAGGAGAAGCTCTATTATTTATGAAGTTTGTGTGCAAATGGTTGAAATTTATAACGAACAAATTCGTGATTTACTATCAAGCAATGGTTCTCAAAAGAGACTTGGGATTTGGAATACTACCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGACTGATGTCCTCGAGTTGATGAATACTGGGTTGACGAATCGTGCAACTAGTGCAACAGCCTTAAACGAAAGAAGCAGCAGATCACACAGTGTTCTCTCTGTTCATGTTCGCGGAACGGATTTGAAGACCAACTCCCTCTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGCGAAAGAGTGGATCGTTCTGAAGCAACTGGTGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCAGCACTTGGAGATGTGATATTTGCTCTAGCACAAAAGAGTGCCCATGTGCCGTATAGGAATAGCAAGTTGACTCAGCTTCTTCAGAGTTCATTAGGCGGTCAAGCGAAAACCCTGATGTTTGTACAGCTTAATCCTGATGTTGCCTCATACTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGAGTTTCTGGGGTTGAATTAGGTGCTGCTCGCAGCAATAAAGAGGGAAAGGATGTCAGAGAACTTATGGAACAGGTGGCATCTCTTAAGGATACAGTTGCAAGGAAGGATGAAGAGATTGTGCAGATGCAGTCACAGAAGGCTAATCACAATGGTTCAAATTCAAAGCCTGTTAGGATCTCACTAAGGCGTGAGTTATCATCTCCAAGAAGACATTCTATAGGAACTCCCCGACACAGCATGAGACTTTCAGGAGCAAGGAGCTCTGGAGACAAAGAGAAAGCAGCTTCTGATGTGGACAACAGCTCAGCGTATAGTGATAAGCATTCAGAAGCTGATTCTCATCAATCAATGGATGATTTCAGGAACAAGTCTAGTCTTCTACAGTTGCAATTAGACAACGAAGATACCAGTCAAAACTTTAATGAGGACGTTGAACTCTTAGGATTTGGAGATGCCGATTCAGAGGAGAGATTAAGTGACATATCTGATGGTGTTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCCGAAATTGATAAGGAAGCTGAAACTACACCTGCTAAGAACACAAAAGCAGGAGACTTTCAAGCTGAGAACACGGAAAAACCCATTGTAGCATCCAAAATTCCCAAAGCTCCACAAGACCCAACAAAACTGCAGACAAGACCTTCCAGGCTATCAATGAACAGAAGCTCCTCGAAGGCTTTATCAAGTCTTAGAAAATCCACAGCTAGTAGCTCTTCCTTGGCGAAGTCCTCTAAAAGATGGCAATAG 3216 0.4055 MDNLNGFPRGSVFEDSQLASLVNWINAVLPNFNLPLETSEEELRSWLRDGSVLCSILDKLVPGSVERGNGSLEELVGVKRFLVALDDLALPGFELSDLEQGSMLPVLHCLETLKTHFACNVARGNIQSSRKRWDRSDLTPLEETDSCLKDASKIQRAVDSSVVSDEVASLDGLKSNEMSQLKRGSHVDLSDAKLMELVKSNSLDTTSTELLFNIGNRILGDIFERKNGDVPHAQRAVCLLRKILQVIELRFSNQAEGMKNQNNLFKAREGKYQSRMNALETLAAGTTEENEVVTGWVQQLKFTLQLEQNKFEEKKKLEDQDFSRLKKEKIRNEIEISALKQELEMARGTHEEQVLQLELQANESKAEYEKKIQELERHLANTRKRVKDLEASSESRYLKWKNKEHTYQSFLNSQHRAIQKLKAGMKSIKNEVIKTKGSYMEEFKYFGIKVKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQKHSTVEFVGDDGDLVVSNPLKPGKESRKHFKFNKVFGQVSTQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSNSDWGVNYRALHDLFHISQTRRSSIIYEVCVQMVEIYNEQIRDLLSSNGSQKRLGIWNTTQPNGLAVPDASMHSVNSMTDVLELMNTGLTNRATSATALNERSSRSHSVLSVHVRGTDLKTNSLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGKDVRELMEQVASLKDTVARKDEEIVQMQSQKANHNGSNSKPVRISLRRELSSPRRHSIGTPRHSMRLSGARSSGDKEKAASDVDNSSAYSDKHSEADSHQSMDDFRNKSSLLQLQLDNEDTSQNFNEDVELLGFGDADSEERLSDISDGVLSMGTETDGSISSIVEYTLFPEIDKEAETTPAKNTKAGDFQAENTEKPIVASKIPKAPQDPTKLQTRPSRLSMNRSSSKALSSLRKSTASSSSLAKSSKRWQ 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1211 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 842 IPR027417 -
Lal16g1211 1071 Pfam Calponin homology (CH) domain 19 118 IPR001715 GO:0005515
Lal16g1211 1071 PRINTS Kinesin heavy chain signature 555 576 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 PRINTS Kinesin heavy chain signature 678 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 PRINTS Kinesin heavy chain signature 709 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 PRINTS Kinesin heavy chain signature 758 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 Gene3D - 13 119 IPR036872 -
Lal16g1211 1071 PANTHER KINESIN-LIKE PROTEIN KLP-3 13 1071 - -
Lal16g1211 1071 SMART ch_5 17 116 IPR001715 GO:0005515
Lal16g1211 1071 SUPERFAMILY Calponin-homology domain, CH-domain 16 117 IPR036872 -
Lal16g1211 1071 MobiDBLite consensus disorder prediction 888 922 - -
Lal16g1211 1071 Pfam Kinesin motor domain 486 806 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 MobiDBLite consensus disorder prediction 997 1071 - -
Lal16g1211 1071 Coils Coil 822 849 - -
Lal16g1211 1071 Coils Coil 322 392 - -
Lal16g1211 1071 ProSiteProfiles Kinesin motor domain profile. 480 808 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 ProSiteProfiles Calponin homology (CH) domain profile. 15 118 IPR001715 GO:0005515
Lal16g1211 1071 MobiDBLite consensus disorder prediction 869 922 - -
Lal16g1211 1071 Gene3D Kinesin motor domain 422 810 IPR036961 -
Lal16g1211 1071 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 13 1071 - -
Lal16g1211 1071 SMART kinesin_4 478 816 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal16g1211 1071 MobiDBLite consensus disorder prediction 1031 1071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1211 Lal-Chr16 8423337 8431702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1211 468 842 Calmodulin-binding Proteins AT5G65930 41.223 1.32e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1211 K10406 - gmx:100812813 1602.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1211 16 8423337 8431702 Lal16g1211 16 8423337 8431702 ECH
Lal16g1211 16 8423337 8431702 Lal15g1390 15 16064120 16071744 LSH