Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1202 ATGTCTTCTGATTTTTATCCTTTTGGCACTACCAATATCCACACACAAACACATTCAACCTCAGACATGGTCTCATCTTCTGATGATGGAGGTGGAGACCTTCTTTTTTTCTCTGAATCTTTCCCTTTCTTCACTGATATACCTCAAGAGAATTCCAACAACACTAACCAACAACAATTTAATGAAACTCTTCATTCTTCTTTAGACCCTTTTCCCCCTTCTTTCTTCTCTTTCTCTCCTCCAACTACCAACTTGGAAAACTTAACCCTTTATCATCAACCTAACCATGTGCAACCCTTATCAAATACCACAACTTTAGAAAATGAATTTGGAAGTTTCTCATCAGCTTTAGATGGGTTTGAAGTGAAAAGTGAGGAATGCCAATTGGGTATTGATTATAATATTAATACATATAATCAGCATCATTTTTTTCCTCATAGTTATAGTGGTGCTGAAAATGTATCAAAGTACATGCAAAGAAGTTTCAGCAGTAACTCTTTTGATGGGAAACCTGGTTTTCTGTTCCAATCTCACTGTGACAGACTCGTAGATTCACCAAATTTTCAAAGGCATGACATCAATTCACCTGAAAACAGTTCATTCGATGGACAAATGAGAAGAGTGTGTAGCACAGGAGATTTACAGAACATGAAAGTAAATAACATCTCTCAAACGGAGGAAGAACCAAACTTAAAAGTAGGACGTTACAGTGCAGAAGAAAGAAAAGAAAGGATTTCTAAATACAGAGCAAAGAGAAGCCAGAGGAACTTCAACAGAACCATTAAGTATGCATGCCGAAAGACACTAGCAGACAATAGACCACGCATACGTGGCAGATTTGCACGCAATGATGAGGCTATTGACATTCCAAAGGTTCAATGCTCTACCAAATATGTAGAAGAAGTTGATTTCTGGATTGAAGAGTTGCATGAAGAACAAGAGGGTGTAACAATGGGAGCAGAAGAATATGTGAACAATTTTGGAGCTAGTCAATTTCAGTATTGTGGCTTTTAA 1014 0.3728 MSSDFYPFGTTNIHTQTHSTSDMVSSSDDGGGDLLFFSESFPFFTDIPQENSNNTNQQQFNETLHSSLDPFPPSFFSFSPPTTNLENLTLYHQPNHVQPLSNTTTLENEFGSFSSALDGFEVKSEECQLGIDYNINTYNQHHFFPHSYSGAENVSKYMQRSFSSNSFDGKPGFLFQSHCDRLVDSPNFQRHDINSPENSSFDGQMRRVCSTGDLQNMKVNNISQTEEEPNLKVGRYSAEERKERISKYRAKRSQRNFNRTIKYACRKTLADNRPRIRGRFARNDEAIDIPKVQCSTKYVEEVDFWIEELHEEQEGVTMGAEEYVNNFGASQFQYCGF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1202 337 PANTHER CCT MOTIF FAMILY PROTEIN 31 334 - -
Lal16g1202 337 Pfam CCT motif 241 283 IPR010402 GO:0005515
Lal16g1202 337 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 31 334 IPR045281 GO:0009909
Lal16g1202 337 ProSiteProfiles CCT domain profile. 241 283 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1202 Lal-Chr16 8328023 8330377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1202 222 306 C2C2-CO-like Transcription Factor Family AT3G02380 37.647 1.21e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal16g1202 CCT 5.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1202 - - gmx:102665661 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1202 16 8328023 8330377 Lal16g1202 16 8328023 8330377 ECH