Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1196 ATGGCCACAAAAGAGTCAAGCTCAGCTGCTTCTGCTTCAGGGGAAGCTAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCACAATATAATGTGTATGGAAACTTGTTTGAGGTGTCCTCCAAGTACATGCCGATTCGCCCTATCGGTAGAGGTGCTTGTGGCACTGTCTGCGCTGCTGTTAATTCCGAGACGCACGAGCAAGTTGCGATAAAGAAGATAGGGAATGCATTTGACAATATAGTTGATGCTAAAAGGACATTGAGGGAAGTTAAGCTCCTTCGTCATATGGACCATGAAAATATCATTGCCATCAAGGATATCATACGACCACCAAAAAAGGAGACCTTTAATGATGTCTACATTGTTTATGAATTGATGGACACTGATCTTCATCATATAATTCATTCTGACCAACCTCTCACTGATGATCACTGTCAGTACTTCTTATACCAGCTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCGAGTAATTTACTTATGAATGCAAACTGTGACCTTAAAATTGGGGACTTTGGCTTGGCAAGGACAACATCTGAGACAGACTTCATGACTGAATATGTTGTCACAAGATTGTACCGCGCTCCAGAATTGCTCCTTAATTGTTCTGAGTACACTTCTGCTATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCACCAACTAAGGCTGATAACTGAGGTGATAAACTTTTGTGAACTCTGCTTGGATACTGAAGGTTCACCTGATGATGCAAGTCTTGGGTTTCTTCGAAGTGATAATGCCAGAAGATATTTTAGACAGCTTCCACAATACCGGAAGCAAACATTCTCTGCTAGATTTCCTAATGTGTCACCAGAGGCACTGGATCTGCTAGAAAAGATGCTTATCTTTGATCCGAACAAACGCATTACAGTTGATGAGGCACTATGTCATCCATATCTTTCATCACTTCATAAGATCAATGCCGAACCAATCTGTCCAAGGCCATTCACTTTTGATTTTGACCAGCCAACATGCACTGAAGAGAACATCAAGGAACTCATCTGGAAAGAATCAGTGAAGTTCAATCCAGATCCACCATCTCAGTAA 1167 0.4147 MATKESSSAASASGEAKIKRVLTHGGKYAQYNVYGNLFEVSSKYMPIRPIGRGACGTVCAAVNSETHEQVAIKKIGNAFDNIVDAKRTLREVKLLRHMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLHHIIHSDQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRLYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITEVINFCELCLDTEGSPDDASLGFLRSDNARRYFRQLPQYRKQTFSARFPNVSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHKINAEPICPRPFTFDFDQPTCTEENIKELIWKESVKFNPDPPSQ 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1196 388 SUPERFAMILY Protein kinase-like (PK-like) 38 346 IPR011009 -
Lal16g1196 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 387 - -
Lal16g1196 388 Pfam Protein kinase domain 46 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1196 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lal16g1196 388 ProSiteProfiles Protein kinase domain profile. 44 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1196 388 CDD STKc_TEY_MAPK 38 383 - -
Lal16g1196 388 SMART serkin_6 44 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1196 388 Gene3D Transferase(Phosphotransferase) domain 1 128 367 - -
Lal16g1196 388 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 387 - -
Lal16g1196 388 Gene3D Phosphorylase Kinase; domain 1 28 377 - -
Lal16g1196 388 ProSitePatterns MAP kinase signature. 79 182 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1196 Lal-Chr16 8236690 8239939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1196 7 383 MAP Kinase Gene Family AT4G01370 78.571 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal16g1196 Pkinase 2.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1196 - - gmx:100807109 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1196 16 8236690 8239939 Lal16g1196 16 8236690 8239939 ECH