Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1176 ATGAGAACTTTTGAGATGGCTTCGAATTCTACTTCTGGATATGTCTGCCCTCCGCCGATGAAACCTGCATCAAATGGGATATTTCAAGGGGATAACCCTCTTGATTTTGCACTTCCCCTGGCTATTTTACAGATATGCCTTGTTTTCGTTGTCACGAGGGGACTGGCGTATCTTCTAAGACCTTTAAGGCAGCCACGAGTTGTTGCGGAGATTGTTGGAGGAATAATACTTGGGCCATCAGCATTGGGACGGAATAGAAGCTACTTGCAAGCGATTTTCCCACCCAGGAGTCTTACAGTGTTAGATACTCTAGCAAACCTTGGCCTTTTGTTCTTTCTATTTCTAGCAGGTCTAGAGTTAGATCCTAAATCTTTGCGCAAAACTGGGAATCAGGCCCTTGGAATTGCTCTTGCTGGAATAAGCCTTCCCTTTGTATTAGGAATTGGTTCATCATATGTTCTCCAAGCAACAATTGCCAAAGGAGTAGATGCTACTGCATTTCTTGTATTTATGGGTGTTGCTCTTTCCATAACTGCCTTTCCCGTATTAGCTCGTATTCTGGCTGAGTTGAAACTTTTAACCTCCAATGTTGGCAGAACGGCTATGTCAGCAGCAGCAGTTAATGATATTGCTGCGTGGATTCTGCTTGCATTGGCTGTTGCCTTATCAGGTAGAAGCCAATCTCCACTTGTGTCATTGTGGGTCTTCTTAAGTGGATGTGGATTTGTCGTCTGTTCAATTCTCATCGTCCCTCCAATTTTCAAATGGATGATCCAGCGATGCCATGAAGGCGAGCCTGTCGATGAGAGATACATATGTGCTACATTAATTGCTGTTCTGGCTGCTGGGTTTGTTACAGATGCTATCGGAATCCATGCCATGTTTGGTTCTTTTGTTATTGGAGTTTTGGTTCCAAAAGATGGACCATTTGCAGGTGCTCTAGTAGAGAAACTAGAGGATCTTGTGTCGGGTGTTTTCCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATATAGCCACCATTCAGGGGCTGCAATCATGGGGCCTTCTGGCTTTGGTTATTTTTACTGCCTGTTTTGGGAAGATTGTTGGGACCATTGTGGTTTCTATTTTCTTGAAAGTACCTTTGAAGGAGGCTTTAGCACTGGGATTCCTAATGAACAGTAAAGGTTTGGTTGAATTAATTGTCCTCAACATTGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATTATGGTTCTGATGGCTCTCTTTACTACCTTCATTACCACTCCTGTTGTCATGACTGTGTATAAGCCTGCGAGGAAGGCAAAATCAGCCGTTTACAAATACAGAACAATTGAAAGAAAAAATACAAACAGCCAGTTGATGATCCTTGCCTGTTTCCATAGTGCAAGAAATATCCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAACCCAGAATCGGAATGCACTGTGTGTTTATGCAATGCACCTTAAAGAATTTTCTGAGAGATCATCATCAATACTAATGGTACATAAGGCTAGAAAAAATGGGTTACCGTTCTTTAATAAACGACATGGTGCAAATTGTGGCCATGTTGTTGTGGCATTTGAGGCTTATTGTCAACTAAGCCAAGTGTCTATCCGGCCAATGACAGCAATCTCATCCATGACAAACATGCATGAGGACATTTGTGAAACAGCTGAGAGAAAAAGAGCTGCACTCATTATTCTTCCATTTCATAAGCATCAAAGATTGGATGGCTCATTAGAAACTACAAGAAATGATTTTAGATTGGTTAACAAAAGGGTACTTGAGCATGCTCCTTGTTCAGTTGGAATTCTTGTTGATCGTGGGCTCGGTGGTTCATCCCATGTATCTGCAAGCAATGTTTCTTATTGCATTACAGTTCTTTTCTTTGGTGGCAGTGATGACCGTGAGGCCCTTGCTTATGGAGCTCGTATGGCTGAGCACCCAGGCATAAGGTTAGTCGTTCTACGCTTTGTTGTGGAACCAAGGATCAAAGGAGAGATTGTAATAGTTGATGTGAGCGGAGGCGAATCCTCCCACACCGGCTCAGTCTCAGAGGACGAGGAGGTCCTTACTGAATTCAAGCAGAAAATAGCCAATGATGATTCTATCATATATGAAGAGAAAACAGTAAACGATGATGCAGAAACAGTCGCCGTTATCCGAGAGTTTAGCCGATGTAATCTGTTTCTTGTTGGTCTAAAGCCAGAAGGTGAATTGGCCAATGCTTTGAACAGAAGCGAATACCCAGAACTGGGACCTGTTGGTGGTTTATTGGTATCAAAAGATTGTCCTACAATAGCAACTGTTTTGGTGATGCAACAGTATCACAATGGGGTGAAGGGTGACATCAAAAACTGA 2391 0.4245 MRTFEMASNSTSGYVCPPPMKPASNGIFQGDNPLDFALPLAILQICLVFVVTRGLAYLLRPLRQPRVVAEIVGGIILGPSALGRNRSYLQAIFPPRSLTVLDTLANLGLLFFLFLAGLELDPKSLRKTGNQALGIALAGISLPFVLGIGSSYVLQATIAKGVDATAFLVFMGVALSITAFPVLARILAELKLLTSNVGRTAMSAAAVNDIAAWILLALAVALSGRSQSPLVSLWVFLSGCGFVVCSILIVPPIFKWMIQRCHEGEPVDERYICATLIAVLAAGFVTDAIGIHAMFGSFVIGVLVPKDGPFAGALVEKLEDLVSGVFLPLYFVSSGLKTDIATIQGLQSWGLLALVIFTACFGKIVGTIVVSIFLKVPLKEALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPVVMTVYKPARKAKSAVYKYRTIERKNTNSQLMILACFHSARNIPSMINLIEASRGTQNRNALCVYAMHLKEFSERSSSILMVHKARKNGLPFFNKRHGANCGHVVVAFEAYCQLSQVSIRPMTAISSMTNMHEDICETAERKRAALIILPFHKHQRLDGSLETTRNDFRLVNKRVLEHAPCSVGILVDRGLGGSSHVSASNVSYCITVLFFGGSDDREALAYGARMAEHPGIRLVVLRFVVEPRIKGEIVIVDVSGGESSHTGSVSEDEEVLTEFKQKIANDDSIIYEEKTVNDDAETVAVIREFSRCNLFLVGLKPEGELANALNRSEYPELGPVGGLLVSKDCPTIATVLVMQQYHNGVKGDIKN 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1176 796 Pfam Sodium/hydrogen exchanger family 47 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal16g1176 796 PANTHER CATION/H(+) ANTIPORTER 18 12 791 - -
Lal16g1176 796 Gene3D - 40 445 IPR038770 -
Lal16g1176 796 PANTHER CATION/H + ANTIPORTER 12 791 - -
Lal16g1176 796 Gene3D - 532 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1176 Lal-Chr16 8055500 8059386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1176 6 794 Antiporter Super Family AT5G41610 69.472 0.0 1088
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1176 - - gmx:100810155 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1176 16 8055500 8059386 Lal16g1176 16 8055500 8059386 ECH