Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1158 ATGGAGAGTAACTTGAGCTGGGAGCAGAACACACTCATCAATGAGTTAATTGAAGGGATGGAGGTAGCAAGAAAATTAAAAGCAGACTTGAAGACGCCATATTCGGTGGACACAAGGGAAATGCTGGTACAGAGGATATTATCTTCTTATGAAAAGGCTCTATTGATTCTAAATGCATCAGCTGCGAAGTCGCAGACCACGAGTCCAACGACAGTGAGTTCAGTACCGGAGTCGCCGATATCTATGGATGGAAATCCTATGAGGGATGGCGTTGATGGGGCCATCAAGAGTGACAAGGGGATTAAACATGATTCAAAGAAAAGAAAGACAATGACCAAATGGATGGATCAAATTAGAGTAAGTTCAGAGAGTGGCCTTGAAGGATCACATGAAGATGGCTACAATTGGAGAAAATATGGGCAGAAAGACATCCTTTGTGCCAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACGCAGGGCTGCTGGGCCACGAAGCAAGTACAGAGATCGGATGAGGATCCCACTATATTTGACATAACTTACAGAGGAAAACATACCTGTTCTCAGGGAAGTAATGTCGCTCTGGTACCTAAGTCACGAGACGAACAAGAGAAACCATGTAGTGATAATAGTTATATTCATGAAGCAAAGCAACCACAAGAAAGCCTTACCATGCTCAGAAACAACTTAACTGTCAAGACGGATAATCTAGGAAATGAAGAAAAGCCATATCCTTTCACATTTCCATCGACTTCATTCGGATGCATGGCAGAAGAAAATCAAAACTTCCTTCCTTTGGCCGTAGACAATGATCCCTTCTTGAGCAGCCTTTTCCAAACACACTTATTATCTTCAACTACACCAGAGTCAAACTATTTCCCATCTCCATCTTTCCAGATGAATGAGTTTGATTGGGTCTATAACATGCCGCATTCAGAATCTGATATTACTGAGATCATTTCCACCAACACATCAGTCACCAATTCTCCAATTCCCGAGTTCAATTTCCCACTTGATCCAGTGGAAATCAATCCAAATTTCCCTTTCAATTCCCCAGGATTTTTCTCCTGA 1080 0.4213 MESNLSWEQNTLINELIEGMEVARKLKADLKTPYSVDTREMLVQRILSSYEKALLILNASAAKSQTTSPTTVSSVPESPISMDGNPMRDGVDGAIKSDKGIKHDSKKRKTMTKWMDQIRVSSESGLEGSHEDGYNWRKYGQKDILCAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGSNVALVPKSRDEQEKPCSDNSYIHEAKQPQESLTMLRNNLTVKTDNLGNEEKPYPFTFPSTSFGCMAEENQNFLPLAVDNDPFLSSLFQTHLLSSTTPESNYFPSPSFQMNEFDWVYNMPHSESDITEIISTNTSVTNSPIPEFNFPLDPVEINPNFPFNSPGFFS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1158 359 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal16g1158 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 355 IPR044810 GO:0003700
Lal16g1158 359 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal16g1158 359 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal16g1158 359 Pfam WRKY DNA -binding domain 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal16g1158 359 MobiDBLite consensus disorder prediction 66 86 - -
Lal16g1158 359 MobiDBLite consensus disorder prediction 66 80 - -
Lal16g1158 359 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal16g1158 359 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1158 Lal-Chr16 7911236 7914946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1158 5 351 WRKY Transcription Factor Family AT4G11070 39.266 5.96e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal16g1158 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1158 - - gmx:100815760 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1158 16 7911236 7914946 Lal16g1158 16 7911236 7914946 ECH
Lal16g1158 16 7911236 7914946 Lal4g0469 4 3303151 3305538 ECH
Lal16g1158 16 7911236 7914946 Lal6g0649 6 4239604 4242756 ECH