Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1124 ATGGATGCACAACTCATGCAAAACCATCCACCACGACCACTAACAGAGAAACCAACATATGGTGCACCGCGATTATCGGACGATGAAATCAAATCACCATTCACAAGATCTAGTAAATCATATCACAAATCTTTTGAATCCTCAATTCCGGATTCTGATATATCATTCGTGAGCAACGGAAGACCAAGCGTTGACAGGATGTTCCCTTCATTTTATGATGATATGGATTCTGGAAGGCTTTCATCAGGCTCAGATTGTGACGCCAGAAGCTACGGTTCATCGTTCTCGGGTGCTAAGTCGATTGATCATGGTGACTACTCGTTCTGTTCACAAGACAGTGGGTACTCAACTTCATCGGCAAGGCTATCAAGTTCGGATGATGTAGAAGCTGAAATGAGGAGATTGAAGTTAGAACTGAAGCAGACAATGGAAATGTACAGTACAGCTTGCAAGGAAGCTCTGACAGCAAAGCAAAAGGAAATGGAACTTCAGCGTTGGAAATTGGAAGAACAAAGGAAAATTGAAGAGTTGAGAATGACTGAAGAAGCAGCATTGGCAGTAGCTGCGAAGGAGAGAACAAAAGCTAAGGCAGCAATGGATGCAGCAGAAGCAAATCATAAAATTATAGAGTTCGAAGCACAACAAAGAATGAACACAGAATCTGATCAGAAGAACAAGACAGAAGATACTATTTCATATAGTCCTGTGAGGTATAGAAAATACAGTATTGAGGAGATTGAAGAAGCAACAAACAACTTTGACAACACTCTCAAGGTTGGTGAAGGAGGTTATGGGCCAGTGTTTAGGTGTGAACTAGATCACACACCAGTTGCAATTAAAGTGCTTAAGCCAGATGCAGCTCAAGGACGGTCACAGTTTCAGCAAGAGGTTGAAGTGTTAAGTTCCATGAGGCATCCAAACATGGTTCTCCTCCTTGGAGCTTGTCCTGAATATGGTTGCCTAGTGTATGAGTACATGGCTAATGGAAGCTTGGATGACTGCCTCTTCAGGAGAGGTAAGATACCAGCTCTTCCTTGGCAACTAAGATTCAGAATTGCTGCAGAAATTGCTACCGGCCTCAATTTCCTCCATCAAGCAAAACCTAAACCACTGGTGCACCGTGACTTAAAACCTGGAAACATCTTGCTCGACCGCAACTTTGTGAGCAAGATTAGTGATGTTGGATTGGCCAGGCTAGTCCCTCCTTCAGTTGCAGACACTGTAACACAGTATCGCATGACATCAACCGCTGGAACATTCTGTTACATTGATCCTGAGTACCAGCAAACAGGCATGCTAGGAATCAAGTCTGATGTATATTCACTTGGGATCATGCTGCTACAGATTATAACAGCCAAGCCGCCAATGGGTTTGACTCATCATGTTGGAAGAGCTATTGAGAAAGGTACTTTTGCTGAAATGCTTGACCCTGCTGTTGAGGAGTGGCCAGTTGCACATGCTATGCATTTTGCTAAGCTTGCATTGCAATGCGCGGAAATGAGAAGAAAAGATAGACCTGATCTTGCTAAAGTTGTATTGCCTGAGCTCAATAAGCTTAGAGATTTTGCTGAAGAAAACTTGCCTATGATGATGATGTTTGGTGCAGGATTCGCTACTAGAAATAACAATTATTCGCGCTCCACAGTTCAAGATCAATCTCAATTGTCAGGATTGTCTGGTTATGAAACTCGGTCAACCTCATCGTCTCTGAGTAACAATAGTAGTTTTGTTGCAACAAAGATGATTTGA 1749 0.4271 MDAQLMQNHPPRPLTEKPTYGAPRLSDDEIKSPFTRSSKSYHKSFESSIPDSDISFVSNGRPSVDRMFPSFYDDMDSGRLSSGSDCDARSYGSSFSGAKSIDHGDYSFCSQDSGYSTSSARLSSSDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKEMELQRWKLEEQRKIEELRMTEEAALAVAAKERTKAKAAMDAAEANHKIIEFEAQQRMNTESDQKNKTEDTISYSPVRYRKYSIEEIEEATNNFDNTLKVGEGGYGPVFRCELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSSMRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKIPALPWQLRFRIAAEIATGLNFLHQAKPKPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIITAKPPMGLTHHVGRAIEKGTFAEMLDPAVEEWPVAHAMHFAKLALQCAEMRRKDRPDLAKVVLPELNKLRDFAEENLPMMMMFGAGFATRNNNYSRSTVQDQSQLSGLSGYETRSTSSSLSNNSSFVATKMI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1124 582 MobiDBLite consensus disorder prediction 548 582 - -
Lal16g1124 582 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 2 571 - -
Lal16g1124 582 SUPERFAMILY Protein kinase-like (PK-like) 229 512 IPR011009 -
Lal16g1124 582 PANTHER OS02G0152300 PROTEIN 2 571 - -
Lal16g1124 582 ProSiteProfiles Protein kinase domain profile. 253 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1124 582 Coils Coil 185 205 - -
Lal16g1124 582 Pfam Protein kinase domain 257 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1124 582 MobiDBLite consensus disorder prediction 1 63 - -
Lal16g1124 582 Coils Coil 125 145 - -
Lal16g1124 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Lal16g1124 582 Gene3D Phosphorylase Kinase; domain 1 232 325 - -
Lal16g1124 582 Coils Coil 151 176 - -
Lal16g1124 582 SMART serkin_6 253 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1124 582 MobiDBLite consensus disorder prediction 37 59 - -
Lal16g1124 582 Gene3D Transferase(Phosphotransferase) domain 1 326 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1124 Lal-Chr16 7610593 7614010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1124 26 527 Receptor kinase-like Gene Family AT5G35380 66.405 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal16g1124 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1124 - - gmx:100803837 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1124 16 7610593 7614010 Lal16g1124 16 7610593 7614010 ECH
Lal16g1124 16 7610593 7614010 Lal23g0540 23 8214868 8219340 LSH