Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1117 ATGGCGGGTGCGATGAAGAAGGTGGATAAGATTCGCCAAATGGCGTGTCTCAAAGATCTTCTCATACGGTGGAAGCAAACCTCACTTCGTCGTCGCATCTTAAACGACGCCGTTTCATCTCCACGCGCTCCGTCAGGGTTTCTATTTGTCTACGTTGGAACAGAACGCAAGCGTTTTGTGATCCCAACGCGGTTCCTCAACCTTCCAATCTTCGCGAGTCTCCTGAAAGAAACGGAAGAGGAGTTTGGGTTTAGGTGTAGCGGTGGTTTGGTTTTGCCATGTGAAGTAGGGTTCTTCAACGACGTCGTTGAGTGTCTTCACAAAGATGAGAAAAAATATGGCAAATTTTCTTTGCAGGAATTTGCGAATATGATTTCTGATCCGGGTTTTGATCCTTGCAAAGAAAAGATGATGCCTTTCATTCCTCTTTTGCAAAAAGCTATGGTTTGA 450 0.4533 MAGAMKKVDKIRQMACLKDLLIRWKQTSLRRRILNDAVSSPRAPSGFLFVYVGTERKRFVIPTRFLNLPIFASLLKETEEEFGFRCSGGLVLPCEVGFFNDVVECLHKDEKKYGKFSLQEFANMISDPGFDPCKEKMMPFIPLLQKAMV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1117 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 136 IPR003676 GO:0009733
Lal16g1117 149 Pfam Auxin responsive protein 24 106 IPR003676 GO:0009733
Lal16g1117 149 PANTHER - 2 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1117 Lal-Chr16 7557477 7557926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1117 41 111 Calmodulin-binding Proteins AT3G43120 47.887 1.61e-18 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1117 16 7557477 7557926 Lal15g1476 15 16944221 16944676 LSH