Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1110 ATGAGCAGACAAAAGGGTAGTAGTTGTGATTATGAAGAAGAAATGTGTTCCTCAGATGTGAATAGAAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAAAGATCTTTCAAAAACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGAGATTGCATTAAGTTATTGGTTATCATCCCATCACCCTCTTCAAGTAAAAGGGTGTGGCGGCTTTCAAGATTTACTACTGATTGTACCAGTAATCAGTGGAGATCTGTTTCAGATCAGAAAGAAGTAATTACAAATTCTTGTTCTCAATTGGTGCTTCAACTCCATGGTTTCTATGACCCAGATAAGACAAAGATCAGAGCAAAGATTCTTTCAGGCTATTTATTTGGAGAGGTGGCTGCTGAAGCCAAGAGAGTCCAATCAAGTTGGGTTATATTGGATAAAAAATTGAAACATGAGAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGATTTGGGCCGAAGATTCTACGCTTAAATTTGAACAGTTCACCGAAGATGGAATACAATGAGGGTTATCCATTGTCACTGGAGCTTAATGCATATACAAGAAACTTAAAAGACAAGTCTGATAATTCTGATATAATTAGAGGACCAGCAGTTACTCCTGCTAGTAGTCCAGAGCAAGGGTCGCCGCTATTGACTGCAACTGATATTGGAACATCATCAATATCAAGCACAGATCACGGGACTTCACCATTTTTCAATTTCGATAATTATGAAAGACGGAGGAGAGGTTTTACCTTCGAGGGTCTGACAAATCTTGAGGATATTGAATCTGACTCGGAGAGTGAAAAGCTAAGTTCTTCATCCAAAAGTTCATATTTTCAGCCATGGATTGAGAATGTAATTTGTATTGATGGTGAGTTCTCAAAACATGAAGCCAATATGCAAAGATCCAGTGATAAGTCTTTGGTTTCTACCTATGAAGCTGTGCTTCATAAATTCTCAAAGATGGATCTAGATCCTATTGTAGGAATTCTTAATTGTAAAATTGATGTAAACATAAACAAAAGTGTTAGAGAATCAATTTCACTATCCAGAAATGCCCCTCTTGGACCACCTCCTTTGTGTTCTATTTGTCGGCATAAGGCACCTGCATTTGGGAATCCTCCAAGGTGGTTTACATTTACTGAATTGCAACTTGCCACAGGTGGTTTTTCGCAAGCAAATTTCTTGGCTGAAGGTGGTTTCGGTTCGGTACACCGTGGTATCCTACCAGATGGTCAAGTCATTGCTGTCAAGCAGTATAAATTGGCCAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTTGAGGTCTTAAGCTGCGCACAACATCGTAATGTTGTGATGCTGATTGGATTTTGTGTAGAGGATGGAAGAAGATTGTTAGTTTATGAATACATTTGCAATGCCTCTTTGGACTCTCATCTTTATGGAAGAAAACAGAATGTACTGGAATGGTCAGCACGACAAAAAATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTTGGTTGTATAGTACACCGTGATATGCGGCCTAACAACATCCTTCTAACTCATGATTTTGAAGCATTAGTTGGAGATTTTGGACTTGCTAGGTGGCAGCCTGATGGAGATATGGGTGTGGAAACTAGGGTGATAGGAACATTTGGATATTTGGCTCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCCTTTGGAATAGTATTATTGGAGCTTGTTACTGGAAGGAAAGCTGTGGATATAAACAGGCCCAGAGGCCAACAATGCCTTAGTGAATGGGCACGGCCCTTGCTTGAAGAACATGACATTCTCGATTTACTTGATCCCAGCTTAAGGAACTTCTATGTAGATGACGAGGTTCATCGCATGCTGCAATGTTGCTCTTTGTGCATCAAACGTGATCCTCAATTAAGGCCTCGAATGTCTCAGGTGCTGAGGATGCTGGAAGGTGACATTCTATATGATTGCTATACACATTTCCATTTTCAAGAGCACATTAATAGAGAAAATAAAGAAGGATAA 2097 0.3972 MSRQKGSSCDYEEEMCSSDVNRKVVVVAVKASKDLSKTALVWALTHVVQPGDCIKLLVIIPSPSSSKRVWRLSRFTTDCTSNQWRSVSDQKEVITNSCSQLVLQLHGFYDPDKTKIRAKILSGYLFGEVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRFGPKILRLNLNSSPKMEYNEGYPLSLELNAYTRNLKDKSDNSDIIRGPAVTPASSPEQGSPLLTATDIGTSSISSTDHGTSPFFNFDNYERRRRGFTFEGLTNLEDIESDSESEKLSSSSKSSYFQPWIENVICIDGEFSKHEANMQRSSDKSLVSTYEAVLHKFSKMDLDPIVGILNCKIDVNINKSVRESISLSRNAPLGPPPLCSICRHKAPAFGNPPRWFTFTELQLATGGFSQANFLAEGGFGSVHRGILPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNASLDSHLYGRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPRGQQCLSEWARPLLEEHDILDLLDPSLRNFYVDDEVHRMLQCCSLCIKRDPQLRPRMSQVLRMLEGDILYDCYTHFHFQEHINRENKEG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1110 698 MobiDBLite consensus disorder prediction 206 230 - -
Lal16g1110 698 Gene3D Phosphorylase Kinase; domain 1 376 478 - -
Lal16g1110 698 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Lal16g1110 698 Gene3D Transferase(Phosphotransferase) domain 1 480 687 - -
Lal16g1110 698 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Lal16g1110 698 PANTHER OS01G0253100 PROTEIN 20 678 IPR045271 GO:0004714|GO:0006468
Lal16g1110 698 CDD STKc_IRAK 409 675 - -
Lal16g1110 698 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 20 678 - -
Lal16g1110 698 ProSiteProfiles Protein kinase domain profile. 403 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1110 698 Pfam Protein tyrosine and serine/threonine kinase 407 673 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1110 Lal-Chr16 7505938 7510681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1110 362 669 Trihelix Transcription Factor Family AT1G68690 50.641 1.32e-100 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lal16g1110 PK_Tyr_Ser-Thr 5.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1110 - - aprc:113855006 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1110 16 7505938 7510681 Lal16g1110 16 7505938 7510681 ECH