Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1095 ATGAAGATCGAGGAATTGGATGGTACGGAGTGTAGTGGGGTTGAAGAAGATAAGCAAGAGAAACAAATCGGTAGGGTTGATGCAAAAAGAGCGTTGGTTGGAGCAGGTGCTCGGATCCTGTTTTACCCGACCCTTTTGTATAACGTGCTTCGTAACAAAATTGAAACTGAGTTCAGGTGGTGGGATCAAGTTGATGAGTTTTTATTACTCGGTGCGGTTCCATTCCCTAAAGATGTTCCTCAGTTGAAGCAGCTTGGTGTGGGTGGTGTAATTACTCTAAATGAGCCTTATGAAACTTTGGTACCTTCATCTTTATATCATGCTCATGGGATTGATCATTTGGTCATTCCAACAAGGGATTATCTCTTTGCCCCCTCATTTGCGGATATCAGTCGGGCCGTGCAGTTCATTCACCAGAATGCATGTTGCGGTAAAACTACTTATGTCCACTGTAAAGCTGGGCGAGGGAGGAGCACAACAATTGTGCTTTGCTATCTGGTTGAATACAAGCACATGACACCTGTGGCAGCCCTGGAATATGTGCGATCTCAAAGACCTAGAGTGTTACTAGCACCATCTCAATGGAAGGAGGATTGTTTGGAGAATTGGGTAGGAGGATTTAGACATATTGAACTCAGTTTGGTCGGTGCTGTTCAAGGCTATCACAAACGCAGACCTTGTTCTTTGACACGCTCTCCCTCTGGGGATGCGGTTCTTATAACCAAAGCTGATCTTGAAGGCTACCATAGCGCATGTGATGCTGGTAAAGAGCTGGCCATTGTTCCCAAAGTTCCAAAGACTAAGCCCATGATAGCAAGGCTATCTTGCTTGTTTGCATCCTTAAAAGCAACGGGTAGTTTACCAATGACAAGGCGGATGCCAGTTTCCGAGTCGCGTGCTTGCTAA 906 0.4547 MKIEELDGTECSGVEEDKQEKQIGRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQVDEFLLLGAVPFPKDVPQLKQLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFADISRAVQFIHQNACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVAALEYVRSQRPRVLLAPSQWKEDCLENWVGGFRHIELSLVGAVQGYHKRRPCSLTRSPSGDAVLITKADLEGYHSACDAGKELAIVPKVPKTKPMIARLSCLFASLKATGSLPMTRRMPVSESRAC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1095 301 Pfam Dual specificity phosphatase, catalytic domain 79 196 IPR000340 GO:0008138|GO:0016311
Lal16g1095 301 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Lal16g1095 301 SMART dsp_5 63 199 IPR020422 GO:0006470|GO:0008138
Lal16g1095 301 PANTHER OS01G0739200 PROTEIN 1 301 - -
Lal16g1095 301 PANTHER - 1 301 - -
Lal16g1095 301 CDD PTPMT1 60 196 IPR044596 GO:0004721
Lal16g1095 301 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Lal16g1095 301 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 196 IPR029021 -
Lal16g1095 301 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Lal16g1095 301 Gene3D Protein tyrosine phosphatase superfamily 60 204 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1095 Lal-Chr16 7383548 7386004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1095 29 287 Protein tyrosine phosphatase (PTP) family AT2G35680 55.357 1.94e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1095 - - gmx:100817410 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1095 16 7383548 7386004 Lal16g1095 16 7383548 7386004 ECH