Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1057 ATGGAGACGGATCCTCCACCCAAGAGTTGGAGCATCCACACCCGACCCGAAATAATCGCCAAATACGAAGTCCTCGAACGGGTCGGGTCAGGTGCTTACGCCGACGTCTACCGTGGCCGTCGTCTCTCCGACGACCTTACCGTCGCCCTTAAGGAAATCCACGACTACCAATCAGCTTTCCGTGAAATCGATGCGTTGCAGATCCTCCAGGGCTCCCCAAACGTCGTCGTTTTGCATGAGTACTTCTGGCGCGAAGACGAAGACGCTGTTCTCGTTCTTGAGTTTCTCAGGACCGATCTTGCCACTGTTATCTCTCATGCCGCCAAGGAACGAACTCTCTCCGTTGGTGAGATCAAACGGTGGATGATTCAGATTCTATCTGGTGTTGACACGTGTCATAGGAACATGATCGTGCACCGTGATTTGAAGCCTGCTAATCTCTTGATTTCTGATCATGGCGTCCTTAAGTTGGCTGATTTTGGACAGGCACGGATACTTATGGAGCCTGGATTTGATGCTTCAGAGGAGAACCCACAAGAATACGAACATGGTGCATCTAACCATGAAAGTTCATTCCAACATCCTGAAACTCTTCCTCAGAAAAATCTAGAGCTGGGATCTGTCGGTCATGATGAATATTTTGAAACTTTAGATAAGCTGAGAATGAAGAGCACGACAGAAGACATTCCTGATGGAAATACCTCTTGTCTTGCAACATGCACAACAAGTGACATAGATGATGATATTTTAAAAACTAATTTTTGTGTCGAAGCAATGGAGGGTGAAGAAGGTAAAGAACTTGGTTGTCTCACATCATGTGTTGGAACTCGTTGGTTCAGGGCTCCTGAGCTACTTTATGGATCCACAAATTATGGTTTAGAGATTGATCTCTGGTCCTTGGGATGTATCTTTGCAGAGCTCTTAACTCTGCAACCCTTATTTCCTGGAACCGCAGATATTGATCAGCTCAGCAGAATTATTAATGTTTTGGGCAACCTCGACGATAAAACTTGGCCCGGTTGTTCTACACTTCCTGATTATGGCATAATCTCATTTAGTAAAGTTGAAAACCCTAGAGGTCTTGAAAACTGCCTGCCCAACTGCTCCCCGGATGAAGTGTCTCTAGTCAAAAAATTGGTTTGCTATGATCCAGCACGTAGAGCAACAGCAATGGAGCTACTCCGTGACAAATACTTTGATGAAGAACCTCTTCCTGTTCATGTTTCTGAGCTGCGAGTTCCTTTGACCAGAACTGGCGAAGATAATGGTTCCCCTGGTGGATGGAATGAGTACAATGGCATGGATTCTGACTCTGATTTCGATGACTTTGGCCCAGTGAATATCACCAGAACTGGTACTGGTTTCTCCATGCAGTTTCCGTGA 1383 0.4591 METDPPPKSWSIHTRPEIIAKYEVLERVGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIDALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVISHAAKERTLSVGEIKRWMIQILSGVDTCHRNMIVHRDLKPANLLISDHGVLKLADFGQARILMEPGFDASEENPQEYEHGASNHESSFQHPETLPQKNLELGSVGHDEYFETLDKLRMKSTTEDIPDGNTSCLATCTTSDIDDDILKTNFCVEAMEGEEGKELGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELLTLQPLFPGTADIDQLSRIINVLGNLDDKTWPGCSTLPDYGIISFSKVENPRGLENCLPNCSPDEVSLVKKLVCYDPARRATAMELLRDKYFDEEPLPVHVSELRVPLTRTGEDNGSPGGWNEYNGMDSDSDFDDFGPVNITRTGTGFSMQFP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1057 460 PANTHER CELL DIVISION PROTEIN KINASE 18 407 - -
Lal16g1057 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Lal16g1057 460 Gene3D Phosphorylase Kinase; domain 1 13 108 - -
Lal16g1057 460 Pfam Protein kinase domain 266 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1057 460 Pfam Protein kinase domain 22 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1057 460 Gene3D Transferase(Phosphotransferase) domain 1 109 404 - -
Lal16g1057 460 SUPERFAMILY Protein kinase-like (PK-like) 14 405 IPR011009 -
Lal16g1057 460 MobiDBLite consensus disorder prediction 174 196 - -
Lal16g1057 460 ProSiteProfiles Protein kinase domain profile. 22 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g1057 460 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lal16g1057 460 PANTHER CYCLIN-DEPENDENT KINASE 10 18 407 - -
Lal16g1057 460 SMART serkin_6 22 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1057 Lal-Chr16 7074812 7078173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1057 6 460 Core Cell Cycle Gene Families AT4G28980 63.312 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Lal16g1057 Pkinase 6.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1057 - - mtr:MTR_8g103240 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1057 16 7074812 7078173 Lal16g1057 16 7074812 7078173 ECH