Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1046 ATGGAAAACCAAAACCGTCTCAAACTTCGAATCTCCCGCATGTTCCGATCTTCATTCGGATCCTGCCGTACCCGAAACTTCACTGATGTTATGGAAAAAGCAGTGTTTTCTCCACCTCAAAACCACAGTGTCACCTTCCACCAACTACTAATGGACCCACCCTCCCCAAAACCACGACCCTTTCCTTCCATTTGCAAACCCAAAGTGTCTCAAACATCCCAAACCACAAACGACCAATGCATCATGTCGTTTAAGGATTCACTCCCAAGACCCAAAATCTCAGAAAAGTGCTTACCACCATTTGCCAACAGCAGCAGATCATACCCCCTTCTTTCTCCAAATACTCCCTTCAATGACCCCGTTTTTGGGTTTGAAGAAACAACAAAAAACTCGAAGAGAAACATAAGAAGCAATAAAAAGAAGAAGAAGAACAATACCCAGAAGAGAAGAGAGATTTTCCCATTTAACTCTTGCGCTAAAGACAAAAAATTTGGTGACTATTATTGCTTTGATAGGGACGAAGATGATGAAACAGATACGCTTTTCTCCTCAAAGAGCATATCTTCTGATTCTTCAAGGTCTCGCCGCCGCCGCCGTAAAAAAAACTACGGTGACCGGAAGAACGGTCAGGGATCTGAAATGGGTGTTCTTCCGTTGCATGGGAATGGAAAGGTGAGGGACACGTTCGCGGTGGTTAAGCGTTCGAGTGACCCGTACAATGATTTCAGAACTTCAATGGTGGAGATGATAGTGGAGAAGCAGATATTTTCGCCACGAGATTTGGAGAATCTGTTGCAGTGTTTTCTATCGCTAAATTTGTGCCATCATCATAAGATCATTGTTGAAGTTTTCACTGAGATTTGGGAAGCTTTGTTCTCTGACTGGCTTTGA 891 0.4343 MENQNRLKLRISRMFRSSFGSCRTRNFTDVMEKAVFSPPQNHSVTFHQLLMDPPSPKPRPFPSICKPKVSQTSQTTNDQCIMSFKDSLPRPKISEKCLPPFANSSRSYPLLSPNTPFNDPVFGFEETTKNSKRNIRSNKKKKKNNTQKRREIFPFNSCAKDKKFGDYYCFDRDEDDETDTLFSSKSISSDSSRSRRRRRKKNYGDRKNGQGSEMGVLPLHGNGKVRDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPRDLENLLQCFLSLNLCHHHKIIVEVFTEIWEALFSDWL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1046 296 Pfam Transcriptional repressor, ovate 235 292 IPR006458 -
Lal16g1046 296 ProSiteProfiles OVATE domain profile. 231 290 IPR006458 -
Lal16g1046 296 PANTHER OVATE PROTEIN FAMILY-RELATED 7 296 - -
Lal16g1046 296 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 229 292 IPR006458 -
Lal16g1046 296 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 296 IPR038933 GO:0045892
Lal16g1046 296 MobiDBLite consensus disorder prediction 119 150 - -
Lal16g1046 296 MobiDBLite consensus disorder prediction 181 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1046 Lal-Chr16 6969605 6970495 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal16g1046 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1046 - - adu:107478678 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1046 16 6969605 6970495 Lal16g1046 16 6969605 6970495 ECH
Lal16g1046 16 6969605 6970495 Lal23g0627 23 8999804 9000688 LSH