Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1037 ATGAGAGTTATGGATTCCAGTAGCAACCTGCATGAGAATGACAATGCAGTGAACTTCAAAACCACACCAAGAGGGTTTGTGACCAAACTCAAATCAGGAGCCAAAGAAATGTTCTTCCCTAATGACCTCTTTAGGCATTTGAAGAATGAAGAAAAGCCACTGCGTAGGGTCCTTAAAGTGGTTCAATATTTCATCCCAATCTTGGAGTGGCTCCCGAATTACACTTGGAGTTTGTTTTGCTCAGATTTCATAGCTGGTCTCACTATCACTACCCTTGCTGTCCCTCAAGGCATTAACTATGCCAAACTCGCTTATCTTCCTCCCATCATTGGCTTATATAGCAGCTTCGTCCCATCAATTTTGTATGCTATATTTGGTACATCAAGACACATGGCAGTGGGAACCGTGGCATCATCATCAATACTTATATATCAAACTATCTCAAAAGTGGCAAAGCCAGAAGATGACCCCAAGTTGTACCTTCATTTGGTTTTCACAACTACCCTTATTGCTGGTGTCTTTCAGGCTTCTTTGGGTATTCTCAGGTTGGGGAGAATGGTGGATTTCTTGTCACGCTCAGCTATCACTGGCTTCATTAGAGGGTCAGCAATAATGCTTTCCCTGCATCAACTACAAAGCATTTTTGGGATGAAACACGTTGTGAGTAGTAAAACAGACCTCATAACAGTAGCGAACAACATATGGACCTATAGACATGAGATAAGATTGGAAACCACAGTTCTGGGTGTGATCATCATTATTTTCTTGCAGTTTACTAGATACGTGAGGAATAGGAACCCGAATCTCCAATGGGCATTATCTATAGGTCCAATCACAACTGTAATAATTGGTGGATTTTCTAGTTACCTCGTCAAGGGCCAACAACATGGAATTCAAATTGTGGGTCACCTAGATAAAGGTATAAACCCTTTGTCCATGAAGGATTTGAACTTTGAAAGTAAATATTTACCATCAATACTGAAAGCTGGTTTTATCACAAGCATTTGGTCATTGGCGGAAGGAATAACAGTAGGAAGAAACTTTGCCGAGGTTGATAATTCATCTTATGTTGAAAACAAAGATATGATAGCTTTTGGTCTTATGAACTTATGTGGTTCTTTTACTTCATGTTACTTGACTACTGGACCATTTTCCAAAACGGCTATGAACTGCAATGCAGGGTGTAAGACAGCTATGTCAAACATGGTTCAGGCATTCTTGATGGCATTTATACTACAATTCTTGGCACCATTTTTTTATTACACCCCCCTTTTTGCTCTATCAGCTATTACAGTCTCTACCATGATGGGGTTGATTAATTATACCGAAGCTATTCATCTTTATAAAGTTGATAAGTTTGATTTTATTATTTGCATGGCGGCTTTTCTTGGAGTAATCTTTGGAGCCTTGGATATTGGTCTCATGCTATCAGTTGGTTTTAGTGTGCTTAGAGCACTCTCATATGTGGCTAGGCCTGCAATATGTACGCTTGGTATGTTACCTGACTTGGGTATATATAGAGATGTTGATCAGTACAATGCTTCAACATTCCCTGGAGTTCTGATTATACAACTTGGTGCTCCGATTTTCTTTGCAAATTGTACCTATATCAGAGAAAGAATTATGAGCTATATCCGAAGTGAACAAGAATCCAATGGAAGTATTGTTGAGCAGATCATACTCGACATGTCAGGAGTAACATCCATTGACACCACAGCTATTCAAGGATTATTGGAAACAAATAAAATCTTTGAGATGAATGGAATGAAGATGTCAATAGTAAACCCAAGAATGGAGGTTTTGGAGAAACTCATAGCATCAAGGTTTGTTGACAAGATTGGGAAGAACTCATTTTTTCTAACATTAGACGATGCAGTAAAGGCCAGTATTTACTCACTTCGTGAATCCAAAACAAATGATGATGAAGATGCATTTAGAGAAACTAGTGTCTAA 1953 0.3891 MRVMDSSSNLHENDNAVNFKTTPRGFVTKLKSGAKEMFFPNDLFRHLKNEEKPLRRVLKVVQYFIPILEWLPNYTWSLFCSDFIAGLTITTLAVPQGINYAKLAYLPPIIGLYSSFVPSILYAIFGTSRHMAVGTVASSSILIYQTISKVAKPEDDPKLYLHLVFTTTLIAGVFQASLGILRLGRMVDFLSRSAITGFIRGSAIMLSLHQLQSIFGMKHVVSSKTDLITVANNIWTYRHEIRLETTVLGVIIIIFLQFTRYVRNRNPNLQWALSIGPITTVIIGGFSSYLVKGQQHGIQIVGHLDKGINPLSMKDLNFESKYLPSILKAGFITSIWSLAEGITVGRNFAEVDNSSYVENKDMIAFGLMNLCGSFTSCYLTTGPFSKTAMNCNAGCKTAMSNMVQAFLMAFILQFLAPFFYYTPLFALSAITVSTMMGLINYTEAIHLYKVDKFDFIICMAAFLGVIFGALDIGLMLSVGFSVLRALSYVARPAICTLGMLPDLGIYRDVDQYNASTFPGVLIIQLGAPIFFANCTYIRERIMSYIRSEQESNGSIVEQIILDMSGVTSIDTTAIQGLLETNKIFEMNGMKMSIVNPRMEVLEKLIASRFVDKIGKNSFFLTLDDAVKASIYSLRESKTNDDEDAFRETSV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1037 650 TIGRFAM sulP: sulfate permease 66 625 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g1037 650 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Lal16g1037 650 PANTHER SULFATE TRANSPORTER 3.5-RELATED 11 640 IPR030316 GO:1902358
Lal16g1037 650 ProSiteProfiles STAS domain profile. 510 629 IPR002645 -
Lal16g1037 650 Pfam Sulfate permease family 79 460 IPR011547 GO:0016021
Lal16g1037 650 Gene3D STAS domain 491 630 IPR036513 -
Lal16g1037 650 PANTHER SULFATE TRANSPORTER 11 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g1037 650 Pfam STAS domain 512 625 IPR002645 -
Lal16g1037 650 SUPERFAMILY SpoIIaa-like 512 627 IPR036513 -
Lal16g1037 650 CDD STAS_SulP_like_sulfate_transporter 512 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1037 Lal-Chr16 6899207 6903391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1037 6 637 Inorganic Solute Cotransporters AT5G19600 53.555 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1037 K17471 - gmx:100789107 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1037 16 6899207 6903391 Lal16g1037 16 6899207 6903391 ECH