Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1036 ATGGCTTCCATAGAAAACATTAAGGATGAACATGCAGTGAACTTTGGCACACCAAGAGGGTTTGTCAAAAAACTGAAAAGAGGAATGAAAGAAACTTTCTTCCCTGATGACCCATGTAGACAATTTAATAGAGAAGAAAAAGTATTGCACAAGGCCTTCAAAGGGGTTCAATATTTCATGCCAATCTTCGAGTGGCTTCCTACTTACACATGGCGTTTGTTCATCTCTGACTTCCTAGCTGGACTCACCATTACTAGTCTTGCTGTTCCTCAAGGCATTAATAGCAGCTTTGTGCCCCCAATTGTGTATGCTATTTTTGGCAGTTCAAGGCAACTAGCAGTTGGCACATTTGCATCAGGATCATTACTTATATATCAAACTGTGTCAACTGTGGTTAAGCCAGAAGATGACCCAATCTTGTACCTTCATTTGGTTTTCTCAGTTACCTTTGTTGCTGGTGCCTTCCAAGCATGTTTGGGACTTCTCAGGTTGGGGATATTGGTGGATTTTGTTTCAAATTCAACCATCACTGGGTTTGTAGCAGGAGCAGCAGTAATGCTTTGCCTTCAACAACTAAAGGGCATTTTTGGTCTCAAACATTTCGTTACTAAAACGGACCTCATAACAGTGATGAAGGGCATATGGACCAATAGTCATGAGATAAGATGGGAGACCACAGTTCTAGGTGTGATTTTCATTGTTTTCCTGCAATTTACTAGATACGTGAGGAAGAAAAACCCAAGGCTCTTTTGGGTATCAGCTATAGGTCCAATGACAACCGTAATTGTTGGTGCTGTTTTTACTTACCTCGTCAAGGGCCAAAAGCATGGAATTCAAATTGTGGGTCGCTTAGATAGAGGAATAAATCCTTTGTCCATCAAGGATATTACATTTGAAAGTAAATATTTACCAACAATACTGAAAACGGGTATAATCACAGCGATTATGTCAATGGCGGATGGAATAGCAGTAGGAAGAGGCCTTTCTGTGGTTGAAAATACACCTTATGATGGGAACAAGGAGATGCTAGCTTTTGGTCTTATGAACATATTTGGTTCTTTTACATCATGTTATGTCACTACTGGACCATTTTCCAAAACTGCTGTGAATTACAATGCAGGGTGTAAAACAGCTATGACAAATATAATTCAAGCATTCCTATTGGCACTTATACTACAATATTTGGCACCACTTTTTGGTTACACTCCCCTTGTTGCTCTATCAGCCATTATAGTCTCTGCTGTGTTGGGGTTGATTGATTATACCCAAGCCATTCATCTTTATAAAGTTGACAAGTTTGATTTTATAATTTGCATGGCAGCCTTTCTTGGAGTTACCTTCGTAGCCATGGATTTTGGCCTCATGCTATCACTCGGTCTTGGTTTGGTTAGAGCAGCCTTATATGTGGCTAGGCCAGGGACATGTAGGCTTGGAAAGTTACCTGATGTTGGTTTATATCGAGATGTTGAGCACTATACTACATCAACACTTGAAGGAGTTCTGATTCTACAACTTGGTTCTCCCATACACTTTGCAAATTCTAACTACATCAGAGAGAGAATGATAAGGTATGTTCGAGATGAGCAAGATTCTAGTGGAGATACTATTGAATATATCATACTCGATTTATCAGGAGTGACATCCATTGATACCACTGCTATTGAAGGATTGTTGGAAACAAAGAAAATCTTCGAAAAGAATGAAATACAGATGTCATTTGTAAACCCAAAGATGGAGGTTTTGGAGAAACTGATATTATCAAACTTCGTTGACATGATTGGAAAGGAGTCATTTTTTCTAACATTAGACGATGCAGTAAAGGCCAGTCAATACTCACTCTGTAAATTGAAGACAAATGGTCCTGAAGAGGCAATTCCAGAAACTAGTGTTGTCTAA 1896 0.3924 MASIENIKDEHAVNFGTPRGFVKKLKRGMKETFFPDDPCRQFNREEKVLHKAFKGVQYFMPIFEWLPTYTWRLFISDFLAGLTITSLAVPQGINSSFVPPIVYAIFGSSRQLAVGTFASGSLLIYQTVSTVVKPEDDPILYLHLVFSVTFVAGAFQACLGLLRLGILVDFVSNSTITGFVAGAAVMLCLQQLKGIFGLKHFVTKTDLITVMKGIWTNSHEIRWETTVLGVIFIVFLQFTRYVRKKNPRLFWVSAIGPMTTVIVGAVFTYLVKGQKHGIQIVGRLDRGINPLSIKDITFESKYLPTILKTGIITAIMSMADGIAVGRGLSVVENTPYDGNKEMLAFGLMNIFGSFTSCYVTTGPFSKTAVNYNAGCKTAMTNIIQAFLLALILQYLAPLFGYTPLVALSAIIVSAVLGLIDYTQAIHLYKVDKFDFIICMAAFLGVTFVAMDFGLMLSLGLGLVRAALYVARPGTCRLGKLPDVGLYRDVEHYTTSTLEGVLILQLGSPIHFANSNYIRERMIRYVRDEQDSSGDTIEYIILDLSGVTSIDTTAIEGLLETKKIFEKNEIQMSFVNPKMEVLEKLILSNFVDMIGKESFFLTLDDAVKASQYSLCKLKTNGPEEAIPETSVV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1036 631 Pfam Sulfate permease family 74 440 IPR011547 GO:0016021
Lal16g1036 631 TIGRFAM sulP: sulfate permease 61 605 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g1036 631 PANTHER SULFATE TRANSPORTER 8 618 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g1036 631 CDD STAS_SulP_like_sulfate_transporter 491 602 - -
Lal16g1036 631 PANTHER SULFATE TRANSPORTER 3.5-RELATED 8 618 IPR030316 GO:1902358
Lal16g1036 631 Gene3D STAS domain 471 611 IPR036513 -
Lal16g1036 631 ProSiteProfiles STAS domain profile. 490 609 IPR002645 -
Lal16g1036 631 SUPERFAMILY SpoIIaa-like 491 608 IPR036513 -
Lal16g1036 631 Pfam STAS domain 493 605 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1036 Lal-Chr16 6891175 6896118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1036 11 622 Inorganic Solute Cotransporters AT5G19600 55.343 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1036 K17471 - gmx:100789107 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1036 16 6891175 6896118 Lal16g1036 16 6891175 6896118 ECH