Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1031 ATGCCTAAAGAGCATTGCAATGAACTTAAAATATTGTTCGCATCAATTGGTTATCGCTGGCTACGCGCTTTGAATTTATTCCTAGAGTACCAAGAAACTCAATGCACAATCTCCTTCTGTGCCTCCTCACACTATGAAACCCCACACAACAATCAACGACAACTTCTGTACTACAAAGACGAGTTTGGTGACAGAGGAGAAAACATCACTGTAGACCCATCTCTCGTTTTTGAGAACAACCGTATCAGAAATGCTTACATAGCTTTACAAGCTTTGAAGCAAGCTATTCATTCTGATCCATTGAACTTTACATCCAACTGGGTTGGATCCAATGTGTGCAACTACACTGGTGTTTACTGTGCACCTGCACTCGATAACCCTCAGATCCGTACTGTTGCTGGCATTGATCTCAACCATGGTGATATTGCTGGTTACTTACCAGAAGAACTTGGGTTACTTATAGATCTTGCATTGTTTCACATTAACTCTAACAGATTTTGTGGCATTGTGCCACATAGTTTTGAAAGGTTAAGACTTCTCTTCGAACTTGATCTCAGTAACAACAGGTTCGTTGGGAAGTTTCCAAAAGTTGTGTTAACACTTCCTGAACTGAAGTTTTTGGATCTGAGGTTCAATGATTTTGAAGGAACGGTGCCTAGAGAGTTATTTGATAAGGACCTTGATGCAATATTCATAAACGATAACCGTTTTGTGTTTAATCTTCCTGATAACTTTGGAAACTCGCCGGTTTCGGTTATTGTTCTGGCGAACAACAAGTTCCACGGTTGTATTCCAGCGAGTATTGGAAACATGTCGAACTTGAATGAGATTATTCTGATGAATAATGCGTTCCGTTCGTGTTTACCATCGGAGATTGGGTTGTTGAAGAACATGACGGTGTTCGATGTTAGCTTTAACCAGTTGTTGGGTCCATTGCCTGATTCTATTGGAAACGACGTGAGTCTTGAACAGTTGAATGTGGCTCATAATTTGTTGTCTGGGAATATTCCGGCGAGTATTTGTATGTTGCCGAATTTGAAGAACTTCACTTATTCGTATAACTTCTTCACCGGTGAGCCGCCGGCGTGTTTGGGTGTGGCGGCGTTTGATGATAAGAGGAACTGCTTGCCGGCGCGGCCGTTGCAAAAGTCGGTAGCGCAATGTAAGTCATTTTTGTCTAAGCCTGTAGATTGTTCGTCGTTTGGATGTAAGGCATTTGTTCCTTCACCTTCTCAACCATCACCTTCACCTTCACCTAATACACCTCCTTCGACACCTTCACCTAATACACCTCCTTCTACATCACCTTCGACACCTTCTCCTAATACACCTCCTTCTACATCACCTTCTCCTAATACACCTCCTTCTACACCTTCACCTAATACACCTCCTTCTGCTACACCTTCACCTAATACACCTCCTTCTGCTACACCTTCTCCTAATACACCTCCTTCTACACCACCATCATTACCCGGTGTGGTACCGTCACCTTCTCCACCATCATCACCTGGTGTAGGGCCTACACCTTCTCCGTCAACACCTGTTTATACACCTCCTTCTACACCACCCTCTTCTACACCACCTTCTTTTACACCACCCACTTATACTCCACAATCACCGCCACCACCATTCTACTCTTCTCCACCATCACCACCTGTTTACACCCCACAGTTCCCTCCTCCACCACCACCGGTGTACTCTGCTCCGCCATCGCCACCAGTTTATACTCCACAATCACCTCCGCCACCAGTTTATTCTCCACCATCACCACCCACTTCACCATACTACAGCTCACCCCCATTTTCAAATCAATCACCACCGCCGCCGCCTAAGTCGTCTTCATTACCTTTGTCTCCCTATTTATCACCACCACCACCACCTCCTCCCCCAGTCAATTATTCACCACCATCTCCACCACCTTGTGAAGAACAACCCCCGCCAACTTATGACCAGCATTCACCTCCACCACCACCTCCTCCATCTCCCACACCCTACCTTCCACCATTTTCCCCGTCTCCCCCACCACCACCCGTCTATTTTTCTCCACCTCCACCGCCTCAATATAGTTCCCCACCACCACCACCGCCGGTTCATTACATTTCACCTCCGCCACCACCACCAGTTTACCCTTCTCCACCACCACCACCGGTATACCATTCTCCACCAGCGGCACCAGTATACCATTCTCCACCACCAGCGTCACCGCCACCATGTGAACCAGTATACGGGAACCCACCACCTGCCCCTGTATATGAAGGACCATTGCCACCGATATTTGGAGTGTCATACTCATCACCACCACCACCACCCTTCTATTGA 2319 0.4661 MPKEHCNELKILFASIGYRWLRALNLFLEYQETQCTISFCASSHYETPHNNQRQLLYYKDEFGDRGENITVDPSLVFENNRIRNAYIALQALKQAIHSDPLNFTSNWVGSNVCNYTGVYCAPALDNPQIRTVAGIDLNHGDIAGYLPEELGLLIDLALFHINSNRFCGIVPHSFERLRLLFELDLSNNRFVGKFPKVVLTLPELKFLDLRFNDFEGTVPRELFDKDLDAIFINDNRFVFNLPDNFGNSPVSVIVLANNKFHGCIPASIGNMSNLNEIILMNNAFRSCLPSEIGLLKNMTVFDVSFNQLLGPLPDSIGNDVSLEQLNVAHNLLSGNIPASICMLPNLKNFTYSYNFFTGEPPACLGVAAFDDKRNCLPARPLQKSVAQCKSFLSKPVDCSSFGCKAFVPSPSQPSPSPSPNTPPSTPSPNTPPSTSPSTPSPNTPPSTSPSPNTPPSTPSPNTPPSATPSPNTPPSATPSPNTPPSTPPSLPGVVPSPSPPSSPGVGPTPSPSTPVYTPPSTPPSSTPPSFTPPTYTPQSPPPPFYSSPPSPPVYTPQFPPPPPPVYSAPPSPPVYTPQSPPPPVYSPPSPPTSPYYSSPPFSNQSPPPPPKSSSLPLSPYLSPPPPPPPPVNYSPPSPPPCEEQPPPTYDQHSPPPPPPPSPTPYLPPFSPSPPPPPVYFSPPPPPQYSSPPPPPPVHYISPPPPPPVYPSPPPPPVYHSPPAAPVYHSPPPASPPPCEPVYGNPPPAPVYEGPLPPIFGVSYSSPPPPPFY 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1031 772 MobiDBLite consensus disorder prediction 410 697 - -
Lal16g1031 772 Pfam Leucine rich repeat N-terminal domain 88 120 IPR013210 -
Lal16g1031 772 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 72 558 - -
Lal16g1031 772 SUPERFAMILY L domain-like 86 362 - -
Lal16g1031 772 PANTHER LRR EXTENSIN-LIKE PROTEIN 72 558 - -
Lal16g1031 772 Gene3D Ribonuclease Inhibitor 85 245 IPR032675 -
Lal16g1031 772 MobiDBLite consensus disorder prediction 409 697 - -
Lal16g1031 772 Pfam Leucine rich repeat 158 214 IPR001611 GO:0005515
Lal16g1031 772 Gene3D Ribonuclease Inhibitor 246 376 IPR032675 -
Lal16g1031 772 MobiDBLite consensus disorder prediction 720 746 - -
Lal16g1031 772 PRINTS Proline rich extensin signature 401 422 - -
Lal16g1031 772 PRINTS Proline rich extensin signature 424 440 - -
Lal16g1031 772 PRINTS Proline rich extensin signature 441 458 - -
Lal16g1031 772 PRINTS Proline rich extensin signature 459 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1031 Lal-Chr16 6884610 6887817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1031 43 411 Leucine-rich Repeat extension Gene Families AT3G24480 74.595 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1031 - - gmx:100814585 625.935