Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1009 ATGTACACTTCAAGGAAGAAAATCCATAAGGATAAGGATGCTGAGCCAACTGAGTTTGAAGAATCAGTTGGGCAGGCATTGTTTGATCTGGAAAACACTAACTCGGAGCTTAAGAGTGATCTGAAGGATCTATACATTAATTCAGCTGTACAAGTTGACGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTTCCTTATAGATTAAGGAAAGGTTTCCGAAAGATTCATGTCAGGCTTGTCAGGGAGCTTGAGAAGAAGTTTAGCGGGAAGGATGTAATTGTGATTGCCACCCGGAGGATTGTGAGGCCACCAAAGAAGGGTTCTGCTGTTCAGCGTCCTCGCAGCCGTACACTCACTGCTGTTCACGAGGCAATCTTGGAGGATGTTGTGTTGCCTGCCGAGATTGTTGGGAAGCGTGTGAGGTATAGAGTTGATGGATCCAAGATCTTGAAGGTTTTCCTGGACCCAAAGGAGAGGAACAACACTGAGTACAAGTTGGAGACTTTTGCCGCAGTGTACAGGAAGCTGTCGGGCAAAGATGTTGTGTTTGAGTATCCAATCACAGATGCTTAG 576 0.4601 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNSELKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVIVIATRRIVRPPKKGSAVQRPRSRTLTAVHEAILEDVVLPAEIVGKRVRYRVDGSKILKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPITDA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1009 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal16g1009 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal16g1009 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal16g1009 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1009 Lal-Chr16 6714184 6716552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1009 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 78.010 1.03e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1009 K02993 - gmx:100527642 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1009 16 6714184 6716552 Lal16g1009 16 6714184 6716552 ECH