Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1002 ATGGCACCTAAACGGTTTTTTGATGATTCTAACCAAGACCCTAATAAGCCAAACGATAAACGGATGCGACCTACTAGGCCTTCTTTTGCATCGGTGATAGGAGAAGTGGTTATGGTGAAAAACTTGCAAAGCCTTTTCTCAGGCTTGGAACCTTTGCTTAGAAGAGTGGTAAATGAAGAGGTGGAGCGAGCAATGAGGCGTTGTTATCAACCATCTATGACAAAGTCTCCTTCATTGAGAATCCAAGCATCAAAACAAGCATCAAACTTTCAACTTACATTCAACAAAAAGCTTTCACTTCCAATATTCACCGGTAGCAGAATACTAGACATAGACGGGAACCCCATTCACGTGGTTCTCGTTGATAAAACCAGTAATAACGAAATGGTTCCAACAAGTATACCGCAAGTAATAAAGCTAGAACTTGTGGTTCTTGATGGAGATTTTCCTCATAGTGATAAAGAGTGTTGGATGAGTGAAGAATTCAATAATCATATAGTGAAGGAGAGAACAGGGAAGCGACCATTGCTTACGGGAGAATTGAATATTACCATGAGGGATGGGATTGCACCAATTGAAGACTTAGAGTTCACAGATAATTCTAGCTGGATACGTAGTCGTAAGTTTAGAGTTGCTGTCAGAGTTGCTTCAGAGAGTAATCAATTTGTTCCAATTCGTGAAGGAATGACTGAAGCATTTGTTGTCAAAGATCATCGTGGTGAATGTAAGTTATTTCAACATCATATTTAA 750 0.3933 MAPKRFFDDSNQDPNKPNDKRMRPTRPSFASVIGEVVMVKNLQSLFSGLEPLLRRVVNEEVERAMRRCYQPSMTKSPSLRIQASKQASNFQLTFNKKLSLPIFTGSRILDIDGNPIHVVLVDKTSNNEMVPTSIPQVIKLELVVLDGDFPHSDKECWMSEEFNNHIVKERTGKRPLLTGELNITMRDGIAPIEDLEFTDNSSWIRSRKFRVAVRVASESNQFVPIREGMTEAFVVKDHRGECKLFQHHI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1002 249 PANTHER PROTEIN, PUTATIVE-RELATED 1 248 - -
Lal16g1002 249 Pfam Calmodulin binding protein-like N-terminal domain 90 238 IPR046831 -
Lal16g1002 249 PANTHER OS02G0177800 PROTEIN 1 248 IPR012416 GO:0005516
Lal16g1002 249 MobiDBLite consensus disorder prediction 1 23 - -
Lal16g1002 249 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1002 Lal-Chr16 6649750 6653878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1002 11 248 Calmodulin-binding Proteins AT5G57580 48.760 1.58e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1002 - - gmx:100802257 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1002 16 6649750 6653878 Lal16g1002 16 6649750 6653878 ECH