Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0997 ATGGTGCGTTCTAACCTGCGAACTGCAGTAATCGATTACAATATAACAGTAATCGATTACACTATTGTTGTAATCGATTACACTATTGTTGTAATCGATTACCACATATTAGGGGACAAACCGACTTCCTATGAGAAGTCGGTTTGTGGTGGCTTTACTTCACTTGAGAAGTCGGTTTGGCAGTGTGTGACTTCTCTTGAGAAGTCGAGACTTTGGATGGAAGAAGAAATGAACTTGAATCATGAAATACCAGAGGCCGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAAGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAATGTATGCTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGAGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTTAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAATTTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGTTTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACCTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACTGTATTTGCTGCTGGTATTGTGTCCAATGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATATCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTCTTTGCTGGTTTGCATACGACATCACGTTGTGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTCATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATACTGCTTCCATATATACTAGAGTTGTTTTCAAAGAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTGGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTTTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAAAGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAAATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAATGGAGAGTACCGGGGATTACCTCAAGGTCCAAGAGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGAATTCAATGAAGAATGA 2370 0.3696 MVRSNLRTAVIDYNITVIDYTIVVIDYTIVVIDYHILGDKPTSYEKSVCGGFTSLEKSVWQCVTSLEKSRLWMEEEMNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEMYAMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKIFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDEFNMMWEELIAKHALHNNAWAYQIFDCRSMWARSYIRGKFFAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHTASIYTRVVFKEFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFLLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKSSRYGALSDACRVLCNLACEKEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVNQVRDPVRVRAKWRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNEFNEE 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0997 789 Pfam FAR1 DNA-binding domain 119 203 IPR004330 -
Lal16g0997 789 Pfam MULE transposase domain 323 417 IPR018289 -
Lal16g0997 789 Coils Coil 784 789 - -
Lal16g0997 789 ProSiteProfiles Zinc finger SWIM-type profile. 600 638 IPR007527 GO:0008270
Lal16g0997 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 104 733 IPR031052 GO:0006355
Lal16g0997 789 PANTHER OS02G0262500 PROTEIN 104 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0997 Lal-Chr16 6610058 6612985 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal16g0997 MULE 1.5e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0997 - - lang:109350553 635.95